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cn_combo_scaffold_1256_13

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(12698..13633)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine-5'-phosphate glycosidase {ECO:0000255|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000255|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000255|HAMAP-Rule:MF_01876};; TaxID=379066 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 298.0
  • Bit_score: 339
  • Evalue 6.60e-90
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PSUG_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 298.0
  • Bit_score: 339
  • Evalue 4.70e-90
putative indigoidine systhesis protein IndA similarity KEGG
DB: KEGG
  • Identity: 62.4
  • Coverage: 298.0
  • Bit_score: 339
  • Evalue 1.30e-90

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 936
ATGATCCGGCTCGCTCCCGACGTCGGCGAGGCGCTCCTCCAGCGGCGCGCGGTGGTCGCCCTGGAAAGCTCCGTCCTCGCCCAGGGACTCCCCATCCCCGCCAATCGCGAGGCCGCCGAGCGCATGACCGCGGCCGTCGCGCGCGCGGGCGCCGTCGCCGCCGTCACCGCCGTCGTCGATGGCGTGCCGACCATCGGCCTCATCCCCGCCGAAGTGGAGCGCTTCCTGGCGCGCGAGGGGATTAGGAAGGTTTCATCCCGGGACCTCGCCCCCGCGATGGCGCAGGGCGCCTGCGGCGCGACCACCGTCGCCGCCACCCTCGCCCTAATCGCCGGCAGCGACGTCCGGGTCTTCGCCACGGGCGGCATCGGCGGCGTGCACCGGGCGCCGCCGTACGACGAGTCGGCCGACCTGGTGGCGTTGGCCCGCACGCCGCGCGTGGTCGTCTGCGCCGGCGCCAAGTCGATCCTCGACCTTCCGGCGACACTCGAGCGGCTGGAGACGCTCGGCGTGCCGGTCGTCGGCTACCGGTGCCGCGAATTCCCGGCCTTCTTCTCCACCTCGAGCGCCCTCCCGGTCTCGACGGTTGCCGAGACGCCGGACGAGGTGGCCGCGATCGAGCGCGCCCATCGTGCGCTCGGACGTCGCGAGGCGCTCCTGGTGGTGCAGCCGTGCCCGGCCGCCGACGCCATTCCCCGCGACGAGGTCGAGCGTGCGCTCGGCGCTGCCTTACGAGAGGGCGAGGCGCAGGGAGTGCGGGGCGGTGCCGTCACGCCCTTCCTGCTGGCCGCCGTCGAGCGGGCCACCGGCGGGCGCTCCCTCCGCGCCAACCTCGCCCTCCTCGAGGCCAACGCGGCGCTGGCCGGTCGCATCGCCGTGGCCCTTGCCGGGGACGCCCCGGCGGCCGTGCCGTCCGGTGCCCCCCATGCGTCATGA
PROTEIN sequence
Length: 312
MIRLAPDVGEALLQRRAVVALESSVLAQGLPIPANREAAERMTAAVARAGAVAAVTAVVDGVPTIGLIPAEVERFLAREGIRKVSSRDLAPAMAQGACGATTVAATLALIAGSDVRVFATGGIGGVHRAPPYDESADLVALARTPRVVVCAGAKSILDLPATLERLETLGVPVVGYRCREFPAFFSTSSALPVSTVAETPDEVAAIERAHRALGRREALLVVQPCPAADAIPRDEVERALGAALREGEAQGVRGGAVTPFLLAAVERATGGRSLRANLALLEANAALAGRIAVALAGDAPAAVPSGAPHAS*