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cn_combo_scaffold_2018_3

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(1879..2511)

Top 3 Functional Annotations

Value Algorithm Source
methyl-viologen-reducing hydrogenase subunit delta Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.6
  • Coverage: 208.0
  • Bit_score: 111
  • Evalue 1.20e-21
id=12557744 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 178.0
  • Bit_score: 90
  • Evalue 2.60e-15

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 633
ATGGCGGCGATCGTCGCCCTCGGCATGGGCGTGGCGCTGCGCGCACTCTCGATCGCCCCCATGGCGGGGGCGCCGGCCGATGCCGCCCTGCTCCGGCTCTCGTGGAGTGTCCGCCCCGAGCGGGTGGAGCAGTGTCGGCGCCTGACCGATGAGGAGCTCGCGCAACGCCCGGCACACATGCAGCTGCGATACGAGTGCGAGGGGCACTTCGCGCGCTATCGCCTCAGTGTCCAGGTCGGGGAGCGTGTCGTCGCGGGCGACACGTTGCGTGGCGGCGGGTTCCGGAACGACCGCCCGATTCACGTCTTCGAGGAGTATGCCGTCGCCCCCGGGACGCATCGCGTTCGCGTGGAGGTGGCGCGCATCGACACGGTGCCCCCCTCGTCGGCGGAGGGGGAGACGAAAGACGATCGTGCCGCGCACTCCGCCGACGCTGAGCATACCGGTCAGCGAAGCACGGAGCACGGTACCGAACGCGATGCGCGTGAAGTCGCCGAGCGCTCGCGACGGGCACTGGAGGCCCTCCCCCCTCGCGTCATCCTCGACTCGACGGTCACCATCCCGCCACGCGGTGTCGTGGTGGTCACTTACGAACCCGAAGAACATCGATTTGTCTTCAGGAGTTCACGATGA
PROTEIN sequence
Length: 211
MAAIVALGMGVALRALSIAPMAGAPADAALLRLSWSVRPERVEQCRRLTDEELAQRPAHMQLRYECEGHFARYRLSVQVGERVVAGDTLRGGGFRNDRPIHVFEEYAVAPGTHRVRVEVARIDTVPPSSAEGETKDDRAAHSADAEHTGQRSTEHGTERDAREVAERSRRALEALPPRVILDSTVTIPPRGVVVVTYEPEEHRFVFRSSR*