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cn_combo_scaffold_3108_19

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(25211..25912)

Top 3 Functional Annotations

Value Algorithm Source
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ2_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 233.0
  • Bit_score: 247
  • Evalue 1.80e-62
OmpR family two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 233.0
  • Bit_score: 247
  • Evalue 5.10e-63
OmpR family two-component response regulator {ECO:0000313|EMBL:BAH39929.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas similarity UNIPROT
DB: UniProtKB
  • Identity: 58.8
  • Coverage: 233.0
  • Bit_score: 247
  • Evalue 2.60e-62

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Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 702
ATGTCTCCCTCCCGCCGCTTCCTCGTGGTCGACGACGAGCGCCAGATCAGGCGCGCCGTGGCGCACGTGCTGGAACCGCTGGACGGGAAGGTGAGTGAGGCCGCATCGGGGCGTGAAGCGCTGACCATCGCCGCCGCCGAGCAGCCAGCGCTCGTCGTGCTCGACCTCGGGCTCCCCGACATGGATGGCACGGAGGTCTGTCGCGAGCTGCGCCGGTGGAGCGAAGCGCCCATCCTGGTCCTGACGGCGCGGCACGATGACGAGGCAACGGTCGCGGCGCTCGATGCGGGGGCCGACGACTACGTGACGAAGCCGTTCTCGACGCCGGCCCTGCAGGCGCGCGTGCGCGCCCTCCTCCGCCGCGCGGGCCGGCCCAACGCGGGAGAGCCGGAACGGACGGCGATCGAGGCGGGGGCGTTGCGCATCGACCTGGCGGCGCGCACGGTGACACGCGGTGGCGAACGGGTGCACCTGACACCGACCGAGTACGACCTGCTGGCGACGCTGGCCACGCACGCGGGGCGCGTGATGACGCACACGCAGCTCTTCTCCGCCGTGTGGAAGGGGCGGGTCTTCGGCGACGCGCAGGGGCACCTGCGGGTGCACGTGGCCCACCTGCGCCGTAAGCTCGAGGACGACCCGGTGCGTCCCCGCCACCTGCAGACGGAGCTTGGTGTGGGTTATCGCTTCGTCGTCGATTGA
PROTEIN sequence
Length: 234
MSPSRRFLVVDDERQIRRAVAHVLEPLDGKVSEAASGREALTIAAAEQPALVVLDLGLPDMDGTEVCRELRRWSEAPILVLTARHDDEATVAALDAGADDYVTKPFSTPALQARVRALLRRAGRPNAGEPERTAIEAGALRIDLAARTVTRGGERVHLTPTEYDLLATLATHAGRVMTHTQLFSAVWKGRVFGDAQGHLRVHVAHLRRKLEDDPVRPRHLQTELGVGYRFVVD*