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cn_combo_scaffold_3108

Alias: GEM22_54

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_3108_1
unknown

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1..288
DNA (288bp) protein (96aa)

This feature has no annotations

cn_combo_scaffold_3108_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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325..1653
DNA (1329bp) protein (443aa)
Putative M23B family peptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X7_GEMAT
putative M23B family peptidase rbh
Putative M23B family peptidase {ECO:0000313|EMBL:BAH37987.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (st
cn_combo_scaffold_3108_3
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1671..2594
DNA (924bp) protein (308aa)
Fatty acid hydroxylase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJJ1_CAUST
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:ADG10400.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis
cn_combo_scaffold_3108_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2758..4086
DNA (1329bp) protein (443aa)
Amidase, hydantoinase/carbamoylase family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIT8_RHOMR
amidase, hydantoinase/carbamoylase family
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:AHG88947.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_3108_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4091..4600
DNA (510bp) protein (170aa)
MarR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5J1_GEMAT
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAH37501.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas auranti
cn_combo_scaffold_3108_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4608..7253
DNA (2646bp) protein (882aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87777.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_3108_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(7343..8827)
DNA (1485bp) protein (495aa)
Hydrolase id=4085397 bin=GWA2_Methylomirabilis_73_35 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hydrolase Tax=GWA2_Rokubacteria_73_35_curated
hydrolase
cn_combo_scaffold_3108_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8954..10177
DNA (1224bp) protein (408aa)
peptidase m29 aminopeptidase ii; K01269 aminopeptidase [EC:3.4.11.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
peptidase m29 aminopeptidase ii; K01269 aminopeptidase [EC:3.4.11.-] id=12556887 bin=CNBR_ACIDO species=Deinococcus sp. 2009 genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
cn_combo_scaffold_3108_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10288..11751)
DNA (1464bp) protein (488aa)
Peptidase M20A family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5D0_GEMAT
peptidase M20 rbh
Peptidase M20 {ECO:0000313|EMBL:AHG88113.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_3108_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11820..14984)
DNA (3165bp) protein (1055aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Q9_GEMAT
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG89297.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_3108_11
R_Gammaproteobacteria_41_20, Gammaproteobacteria, Proteobacteria, Bacteria

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15220..16200
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WA25_9GAMM
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_20_curated
hypothetical protein
cn_combo_scaffold_3108_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16248..17270)
DNA (1023bp) protein (341aa)
Signal transduction histidine kinase id=4025044 bin=GWA2_Deltaproteo_65_63 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
signal transduction histidine kinase Tax=GWA2_Deltaproteobacteria_65_63_curated
sensor histidine kinase
cn_combo_scaffold_3108_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17270..18454)
DNA (1185bp) protein (395aa)
Sensor protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ9_GEMAT
sensor protein rbh
Sensor protein {ECO:0000313|EMBL:BAH39936.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM
cn_combo_scaffold_3108_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(18459..19184)
DNA (726bp) protein (242aa)
kdpC; potassium-transporting ATPase C chain (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000255|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000255|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000255|HAMAP-Rule:M
Potassium-transporting ATPase C chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=ATKC_GEMAT
cn_combo_scaffold_3108_15
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19195..21381)
DNA (2187bp) protein (729aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285, ECO:0000256|SAAS:SAAS00017871};; ATP phosphohydrolase [potassium-transporting] B
Potassium-transporting ATPase B chain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZDN8_AZOL4
kdpB; potassium translocating ATPase subunit B
cn_combo_scaffold_3108_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(21383..23098)
DNA (1716bp) protein (572aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275, ECO:0000256|SAAS:SAAS00088861};; ATP phosphohydrolase [potassium-transporting] A
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V6X7_TERSS
cn_combo_scaffold_3108_17
unknown

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comp(23098..23187)
DNA (90bp) protein (30aa)

This feature has no annotations

cn_combo_scaffold_3108_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23498..25141)
DNA (1644bp) protein (548aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ3_GEMAT
ATP-binding region ATPase domain protein
cn_combo_scaffold_3108_19
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(25211..25912)
DNA (702bp) protein (234aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABQ2_GEMAT
OmpR family two-component response regulator
OmpR family two-component response regulator {ECO:0000313|EMBL:BAH39929.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
cn_combo_scaffold_3108_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

26068..26661
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXT6_TRURR
protein of unknown function DUF820
Uncharacterized protein {ECO:0000313|EMBL:AHG89056.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_3108_21
uncultured planctomycete 13FN, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26713..27693)
DNA (981bp) protein (327aa)
Hypothetical membrane protein n=1 Tax=uncultured planctomycete 13FN RepID=A9LH58_9BACT
Hypothetical membrane protein {ECO:0000313|EMBL:ABX10729.1}; TaxID=455065 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete
alkyl hydroperoxide reductase
cn_combo_scaffold_3108_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27974..28594
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGL9_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73715.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
Displaying 22 items

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