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cn_combo_scaffold_5670_1

Organism: CN-SCN_Gemmatimonadetes_22x

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(51..1370)

Top 3 Functional Annotations

Value Algorithm Source
Porin n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BVT7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 393.0
  • Bit_score: 447
  • Evalue 1.30e-122
Porin {ECO:0000313|EMBL:ERM84760.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 393.0
  • Bit_score: 447
  • Evalue 1.90e-122
phosphate-selective porin similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 381.0
  • Bit_score: 438
  • Evalue 2.30e-120

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Taxonomy

Rhodonellum psychrophilum → Rhodonellum → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1320
ATGCGTTCGATCAATCGGGTCGCCATCCCGTTCACCGTCCTCCTCCTCATGGCCGCTTCCGCGGAGGCACAGCGGGGTCGGGCGACCCCGGCGCGTGCCGCGAACCGGGACACGACGTTGGCGTCGGCCGGCGCCGAGGCGGCACCCCGCGCCGTGGTGACGCACGATTCGACCACGCGACGCGACGCGCAAGGGTCGGCCGCACAGAAGCCCGGGGCCAGGCCCTGGTATGAGAAGATCTCGTTGCGCGGCTACACGCAGGTGCGCTACAACCGGCTGCTCGAGACGAACGAGGGGCTCTCCTGCGCGCAGTGCGACCGATCCATCGGCAACAACGGCGGCTTCTTCCTTCGGCGGGGGCGCCTCGTGTTCAGCGGCGACCTGCATCCGCGTGTCTCGTTCTACATCCAGCCCGACTTCGGGGCCGAAGCGGCGGGCGGACAGAACTACCTGCAGATCCGCGATGCCTACTTCGACGTGAACCTCGACGCGCGGAAGGCGCACCGGCTCCGCATCGGCCAGAGCAAGGTGCCGTACGGCTTCGAGAACCTGCAGTCGTCGTCGAACCGCCTCCCGCTCGACCGCAACGATGCCCTCAACAGCGCCATGCCTAACGAGCGCGACATCGGGGTGTTCTACTACTACGCCGGCGCCGAGGCCAGGAAGCGCTTCCGGATCCTGACCGACAGCGGGCTCAAGGGGTCGGGCGACTATGGCGTGCTCGGGGTGGGGGTGATGAACGGCCAGACGGCGAACCGCGCGGAGGCGAACAACTCGCTGCACGCGGTTGCCCGCCTCACCTATCCATGGCGCCTCCCCAGCGGGCAGTTCGTGGAGACGAGCGTGCAGGCGTACCGCGGCCGTTTCGTGGTGCCGTCGAAGTCGAGCGGCGTCGCCGCGCGCCCCGAGTACGACGACGAGCGCATCGCCGCCACGCTCGTGTGGTATGCGCAGCCGTTCGGCGTCGTCGCCGAGTACAACTGGGGGAGGGGGCCGGAGTTCGTCGCCGCGACGCACGCCATCGAGGATCGCCGGCTGCAGGGTGGCTTCGTGCAGTCGATGTACCGCTGGCAGGGGCACGGGCAGGTGATCCAACCCTTTGCCCGGCTGCATTCCTACCATGGCGGGAAGAAGATCGAGCAGGACGCGAAGCACTACGAGGTGCACGAGTTCGAGGCGGGGATCGAGTGGCTCCCCTTCAGCGCCCTCGAGCTCACCGCGCAGTACACCGTTTCGGACCGCGTCTTCGAGGACAATGCGACCATCGGCAATCGCCAACAGGGGCGCTTCCTCCGGCTGCAGGCGCAGTTCAACTATTGA
PROTEIN sequence
Length: 440
MRSINRVAIPFTVLLLMAASAEAQRGRATPARAANRDTTLASAGAEAAPRAVVTHDSTTRRDAQGSAAQKPGARPWYEKISLRGYTQVRYNRLLETNEGLSCAQCDRSIGNNGGFFLRRGRLVFSGDLHPRVSFYIQPDFGAEAAGGQNYLQIRDAYFDVNLDARKAHRLRIGQSKVPYGFENLQSSSNRLPLDRNDALNSAMPNERDIGVFYYYAGAEARKRFRILTDSGLKGSGDYGVLGVGVMNGQTANRAEANNSLHAVARLTYPWRLPSGQFVETSVQAYRGRFVVPSKSSGVAARPEYDDERIAATLVWYAQPFGVVAEYNWGRGPEFVAATHAIEDRRLQGGFVQSMYRWQGHGQVIQPFARLHSYHGGKKIEQDAKHYEVHEFEAGIEWLPFSALELTAQYTVSDRVFEDNATIGNRQQGRFLRLQAQFNY*