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cn_combo_scaffold_5670

Alias: GEM22_64

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_5670_1
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(51..1370)
DNA (1320bp) protein (440aa)
Porin n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BVT7_9BACT
Porin {ECO:0000313|EMBL:ERM84760.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
phosphate-selective porin
cn_combo_scaffold_5670_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1629..2519
DNA (891bp) protein (297aa)
ATPase associated with various cellular activities AAA_5 id=3514175 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ATPase associated with various cellular activities AAA_5
ATPase AAA Tax=GWA2_Rokubacteria_70_23_curated
cn_combo_scaffold_5670_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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2531..3700
DNA (1170bp) protein (390aa)
VWA containing CoxE family protein
VWA containing CoxE family protein {ECO:0000313|EMBL:AHG89701.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
VWA domain containing CoxE-like protein id=2586423 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cn_combo_scaffold_5670_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3759..4844
DNA (1086bp) protein (362aa)
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=5010012 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
cn_combo_scaffold_5670_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4841..5881
DNA (1041bp) protein (347aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein
cn_combo_scaffold_5670_6
Thermobaculum terrenum, Thermobaculum, Bacteria

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5884..6273
DNA (390bp) protein (130aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCT6_THET1
NifU family SUF system FeS assembly protein
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ACZ42601.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
cn_combo_scaffold_5670_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6270..6845
DNA (576bp) protein (192aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
MobA-like protein-like protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3M3_SPHTD
MobA-like protein
cn_combo_scaffold_5670_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6939..8273
DNA (1335bp) protein (445aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJW5_KORVE
amino acid permease
Amino acid permease {ECO:0000313|EMBL:AHG93630.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_5670_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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8514..11546
DNA (3033bp) protein (1011aa)
Putative outer membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA6_GEMAT
putative outer membrane protein
Putative outer membrane protein {ECO:0000313|EMBL:BAH39512.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (s
cn_combo_scaffold_5670_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

11580..12854
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABA5_GEMAT
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG91469.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cn_combo_scaffold_5670_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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12980..15370
DNA (2391bp) protein (797aa)
D-alanyl-D-alanine dipeptidase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DE43_SINAD
D-alanyl-D-alanine dipeptidase
D-alanyl-D-alanine dipeptidase {ECO:0000313|EMBL:AGA27135.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulispha
cn_combo_scaffold_5670_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(15478..17820)
DNA (2343bp) protein (781aa)
Putative membrane associated hydrolase n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CL65_ROBBH
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
membrane associated hydrolase
cn_combo_scaffold_5670_13
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17858..21754)
DNA (3897bp) protein (1299aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomo
Error-prone DNA polymerase n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H8I9_CELFA
cn_combo_scaffold_5670_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21797..23506)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39774.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
cn_combo_scaffold_5670_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23760..24494
DNA (735bp) protein (245aa)
L-threonine-O-3-phosphate decarboxylase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VN91_RHOPX
L-threonine-O-3-phosphate decarboxylase
L-threonine-O-3-phosphate decarboxylase {ECO:0000313|EMBL:ADU42408.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="
cn_combo_scaffold_5670_16
unknown

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comp(24506..24586)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 16 items

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