ggKbase home page

ACD1_50

Alias: ACDUNK_1277.51397.83

Search features with annotation key words

Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD1_50_31
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(31534..31749)
DNA (216bp) protein (72aa)

This feature has no annotations

ACD1_50_32
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31800..32864)
DNA (1065bp) protein (355aa)
fibronectin type III domain-containing protein
fibronectin type III domain-containing protein
Fibronectin type III domain protein n=1 Tax=Geobacter bemidjiensis Bem RepID=B5EAA9_GEOBB (db=UNIREF evalue=3.0e-115 bit_score=418.0 identity=65.71 coverage=86.7605633802817)
seg (db=Seg db_id=seg from=108 to=120)
ACD1_50_33

Not on your lists

comp(33022..34416)
DNA (1395bp) protein (465aa)
seg (db=Seg db_id=seg from=5 to=18)
Uncharacterized protein {ECO:0000313|EMBL:EKD58455.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD1_50_34

Not on your lists

comp(34550..35956)
DNA (1407bp) protein (469aa)
seg (db=Seg db_id=seg from=179 to=198)
Uncharacterized protein {ECO:0000313|EMBL:EKD58455.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD1_50_35
GWB2_OD1_ACD81_rel_46_69, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(36080..37168)
DNA (1089bp) protein (363aa)
fibronectin type III domain-containing protein
fibronectin type III domain-containing protein
Fibronectin type III domain protein n=1 Tax=Geobacter sp. M21 RepID=C6DZV0_GEOSM (db=UNIREF evalue=2.0e-129 bit_score=465.0 identity=63.48 coverage=93.66391184573)
seg (db=Seg db_id=seg from=179 to=193)
ACD1_50_36

Not on your lists

comp(37218..38603)
DNA (1386bp) protein (462aa)
seg (db=Seg db_id=seg from=2 to=23)
seg (db=Seg db_id=seg from=107 to=118)
Uncharacterized protein {ECO:0000313|EMBL:EKD58722.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD1_50_37
GWA2_OD1_ACD81_47_9, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(38625..40043)
DNA (1419bp) protein (473aa)
seg (db=Seg db_id=seg from=2 to=23)
Uncharacterized protein {ECO:0000313|EMBL:KKU89714.1}; TaxID=1619005 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA2_47_9b.;"
ACD1_50_38

Not on your lists

comp(40180..41052)
DNA (873bp) protein (291aa)
deoxyribonuclease
seC-independent protein TATD n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001743958 (db=UNIREF evalue=3.0e-43 bit_score=179.0 identity=38.14 coverage=85.9106529209622)
TATD_1 (db=PatternScan db_id=PS01137 from=3 to=11 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
TATD_3 (db=PatternScan db_id=PS01091 from=224 to=240 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
ACD1_50_39
GWC2_OD1_37_73, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(41163..41606)
DNA (444bp) protein (148aa)
seg (db=Seg db_id=seg from=34 to=47)
seg (db=Seg db_id=seg from=6 to=14)
Uncharacterized protein {ECO:0000313|EMBL:KKQ39212.1}; TaxID=1618697 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWC2_37_73.;"
ACD1_50_40

Not on your lists

comp(41698..43134)
DNA (1437bp) protein (479aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionyl-tRNA synthetase / protein secretion chaperonin n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUB6_SYNAS (db=UNIREF evalue=2.0e-110 bit_score=403.0 identity=45.83 coverage=97.286012526096)
seg (db=Seg db_id=seg from=51 to=65)
ACD1_50_41
GWC1_OD1_38_22, Parcubacteria, Bacteria

Not on your lists

comp(43464..44789)
DNA (1326bp) protein (442aa)
coiled-coil (db=Coil db_id=coil from=46 to=81 evalue=NA)
coiled-coil (db=Coil db_id=coil from=95 to=130 evalue=NA)
coiled-coil (db=Coil db_id=coil from=165 to=207 evalue=NA)
coiled-coil (db=Coil db_id=coil from=211 to=246 evalue=NA)
ACD1_50_42
GWD2_OD1_38_11, Parcubacteria, Bacteria

Not on your lists

comp(44909..45313)
DNA (405bp) protein (135aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=5 to=17)
seg (db=Seg db_id=seg from=37 to=47)
Tax=GWD2_OD1_38_11
ACD1_50_43
GWD2_OD1_38_11, Parcubacteria, Bacteria

Not on your lists

comp(45360..46844)
DNA (1485bp) protein (495aa)
seg (db=Seg db_id=seg from=313 to=326)
seg (db=Seg db_id=seg from=288 to=303)
seg (db=Seg db_id=seg from=7 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD1_50_44

Not on your lists


comp(46981..47634)
DNA (654bp) protein (218aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=3 to=192 evalue=3.2e-48 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ctc_TL5: ribosomal protein L25, Ctc-form (db=HMMTigr db_id=TIGR00731 from=7 to=183 evalue=5.3e-33 interpro_id=IPR001021 interpro_description=Ribosomal protein L25 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
Ribosomal_L25p (db=HMMPfam db_id=PF01386 from=7 to=92 evalue=9.8e-24 interpro_id=IPR020055 interpro_description=Ribosomal protein L25, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
ACD1_50_45
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

Not on your lists

comp(47982..48257)
DNA (276bp) protein (92aa)

This feature has no annotations

ACD1_50_46

Not on your lists

comp(48968..50095)
DNA (1128bp) protein (376aa)
rod shape-determining protein RodA
Rod shape-determining protein RodA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HNZ7_9FIRM (db=UNIREF evalue=2.0e-48 bit_score=196.0 identity=45.03 coverage=79.7872340425532)
transmembrane_regions (db=TMHMM db_id=tmhmm from=265 to=287)
seg (db=Seg db_id=seg from=234 to=246)
ACD1_50_47
GWD2_OD1_38_11, Parcubacteria, Bacteria

Not on your lists

comp(50117..50914)
DNA (798bp) protein (266aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=17 to=31)
Uncharacterized protein {ECO:0000313|EMBL:KKQ50215.1}; TaxID=1618941 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWD2_38_11.;"
Displaying items 31-47 of 47 in total

View Taxonomy