ggKbase home page

ACD1_50_44

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(46981..47634)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 208.0
  • Bit_score: 134
  • Evalue 3.50e-29
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=3 to=192 evalue=3.2e-48 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.20e-48
ctc_TL5: ribosomal protein L25, Ctc-form (db=HMMTigr db_id=TIGR00731 from=7 to=183 evalue=5.3e-33 interpro_id=IPR001021 interpro_description=Ribosomal protein L25 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.30e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGCAAATTGATTACCCTGAAAGCCGACGTTCGCGAATTGGTTGGAAAAAAAGCCAAAAAATTGCGCAGCCAAGATTTAATTCCTGCAGTTATGTATGGAAACAAAATTGAAGCAAAAAATATCTCAGTCGCTTATAATGAATTTAAAAGAGTTTATAGTAAGGCTGGAGAAAGTACCCTAGTTGAATTGGAAGTAGGAAAGGAAAAGGCAAATGTGCTTATTCATGATATTCAATTAGCACCAATGAGCGGGCGCGTTACGCATATCGATTTCTTTCAAGTAAACATGAAAGAAGAAGTGGAAACTGAAATTCCTTTGGAATTTGTTGGAGAATCTGCAGCTGTAAAAGCGCTTGGCGGAATTTTAGTACAAAACATGGATGCTATTCCTGTCAAATGTTTGCCAGCAAATCTTCCAGATAAATTCATTGTTGATCTTACAAAACTTGCAACTTTTGATGACGTGATTTCTGCTGGAAATCTAAAAACTTCCGACAAGGTTGAAATCATGCTTGAAGATGAAGCTGTTATCGCAATGGTAAGTGCACCTCGCTCAGAGGAATCACTTTCAGAGCTAAACAACAAAGTTGAAGAAGATGTAACTAAGGTTGCTGGAGTAGTGAAAGAAGCTGCTACTGGAGAAAAGAAATAG
PROTEIN sequence
Length: 218
MSKLITLKADVRELVGKKAKKLRSQDLIPAVMYGNKIEAKNISVAYNEFKRVYSKAGESTLVELEVGKEKANVLIHDIQLAPMSGRVTHIDFFQVNMKEEVETEIPLEFVGESAAVKALGGILVQNMDAIPVKCLPANLPDKFIVDLTKLATFDDVISAGNLKTSDKVEIMLEDEAVIAMVSAPRSEESLSELNNKVEEDVTKVAGVVKEAATGEKK*