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ACD28_16

Alias: ACD28_68899.3935.9

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_16_1

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3..146
DNA (144bp) protein (48aa)
3..146 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD92707.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD28_16_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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234..989
DNA (756bp) protein (252aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
DIHYDRODIPICOLINATE REDUCTASE (db=HMMPanther db_id=PTHR20836 from=1 to=245 evalue=2.0e-52 interpro_id=IPR011770 interpro_description=Dihydrodipicolinate reductase, bacterial/plant GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: dihydrodipicolinate reductase activity (GO:0008839), Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089), Biological Process: oxidation reduction (GO:0055114))
DapB_C (db=HMMPfam db_id=PF05173 from=110 to=243 evalue=4.0e-36 interpro_id=IPR022663 interpro_description=Dihydrodipicolinate reductase, C-terminal GO=Molecular Function: dihydrodipicolinate reductase activity (GO:0008839), Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089), Biological Process: oxidation reduction (GO:0055114))
dapB: dihydrodipicolinate reductase (db=HMMTigr db_id=TIGR00036 from=1 to=246 evalue=3.4e-31 interpro_id=IPR011770 interpro_description=Dihydrodipicolinate reductase, bacterial/plant GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: dihydrodipicolinate reductase activity (GO:0008839), Biological Process: lysine biosynthetic process via diaminopimelate (GO:0009089), Biological Process: oxidation reduction (GO:0055114))
lysine biosynthesis Jill Banfield (11/15/12)
ACD28_16_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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1123..2004
DNA (882bp) protein (294aa)
Dihydrodipicolinate synthase (EC:4.3.3.7)
seg (db=Seg db_id=seg from=264 to=278)
DHDPS_1 (db=PatternScan db_id=PS00665 from=41 to=58 evalue=0.0 interpro_id=IPR020624 interpro_description=Dihydrodipicolinate synthetase, conserved site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: lyase activity (GO:0016829))
dapA: dihydrodipicolinate synthase (db=HMMTigr db_id=TIGR00674 from=8 to=291 evalue=6.4e-131 interpro_id=IPR005263 interpro_description=Dihydrodipicolinate synthase subfamily GO=Molecular Function: dihydrodipicolinate synthase activity (GO:0008840), Biological Process: diaminopimelate biosynthetic process (GO:0019877))
ACD28_16_4

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2014..3270
DNA (1257bp) protein (419aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=2 Tax=Phytophthora infestans RepID=Q8H711_PHYIN (db=UNIREF evalue=2.0e-90 bit_score=336.0 identity=43.07 coverage=94.9880668257756)
seg (db=Seg db_id=seg from=120 to=130)
ACD28_16_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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3350..3967
DNA (618bp) protein (206aa)
Similar to N-succinyldiaminopimelate aminotransferase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3U7_9BACT (db=UNIREF evalue=4.0e-68 bit_score=260.0 identity=56.8 coverage=99.5145631067961)
diaminopimelate aminotransferase
AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751:SF33 from=49 to=206 evalue=8.3e-65)
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=49 to=206 evalue=8.3e-65)
lysine biosynthesis Jill Banfield (11/15/12)
Displaying 5 items

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