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ACD28_22

Alias: ACD28_28922.4693.9

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_22_1

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comp(110..1567)
DNA (1458bp) protein (486aa)
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
coiled-coil (db=Coil db_id=coil from=49 to=70 evalue=NA)
MTTASE_RADICAL (db=PatternScan db_id=PS01278 from=153 to=173 evalue=0.0 interpro_id=IPR020612 interpro_description=Methylthiotransferase, conserved site GO=Cellular Component: cellular_component (GO:0005575), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
TIGR00089: RNA modification enzyme, M (db=HMMTigr db_id=TIGR00089 from=2 to=482 evalue=7.0e-144 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
ACD28_22_2

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comp(1649..2164)
DNA (516bp) protein (172aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=5 to=24)
coiled-coil (db=Coil db_id=coil from=130 to=158 evalue=NA)
LemA (db=HMMPfam db_id=PF04011 from=12 to=164 evalue=4.8e-12 interpro_id=IPR007156 interpro_description=LemA)
ACD28_22_3

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2391..2642
DNA (252bp) protein (84aa)
2391..2642 + (rbs_motif=TAA rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD93296.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_22_4

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2652..2783
DNA (132bp) protein (44aa)
seg (db=Seg db_id=seg from=10 to=19)
Uncharacterized protein {ECO:0000313|EMBL:EKD93297.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_22_5

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comp(2989..3480)
DNA (492bp) protein (164aa)
AprM
Glycosyl transferase, group 1 n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSX5_9BACT (db=UNIREF evalue=1.0e-18 bit_score=95.1 identity=41.53 coverage=70.7317073170732)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=50 to=154 evalue=1.0e-27)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=30 to=161 evalue=1.1e-27)
Displaying 5 items

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