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ACD28_89

Alias: ACD28_8923.5556.12

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_89_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

56..364
DNA (309bp) protein (103aa)
56..364 + (rbs_motif=TAA rbs_spacer=14bp)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_89_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(376..1590)
DNA (1215bp) protein (405aa)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=56 to=270 evalue=9.3e-14)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=100 to=219 evalue=4.0e-06 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=85 to=219 evalue=0.00035)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_89_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(1804..2439)
DNA (636bp) protein (212aa)
seg (db=Seg db_id=seg from=59 to=75)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_89_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists


comp(2633..3283)
DNA (651bp) protein (217aa)
50S ribosomal protein L25
seg (db=Seg db_id=seg from=191 to=207)
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=7 to=197 evalue=6.4e-48 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ctc_TL5: ribosomal protein L25, Ctc-form (db=HMMTigr db_id=TIGR00731 from=11 to=188 evalue=1.0e-33 interpro_id=IPR001021 interpro_description=Ribosomal protein L25 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
ACD28_89_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3392..3700
DNA (309bp) protein (103aa)
seg (db=Seg db_id=seg from=15 to=28)
coiled-coil (db=Coil db_id=coil from=13 to=38 evalue=NA)
DUF149 (db=HMMPfam db_id=PF02575 from=11 to=97 evalue=5.4e-14 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
YbaB-like (db=superfamily db_id=SSF82607 from=10 to=102 evalue=2.0e-12 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
ACD28_89_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3724..4758
DNA (1035bp) protein (345aa)
adventurous gliding motility protein AgmT
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=327 to=338)
YceG (db=HMMPfam db_id=PF02618 from=54 to=343 evalue=7.1e-71 interpro_id=IPR003770 interpro_description=Uncharacterised protein family YceG-like)
ACD28_89_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

4821..5381
DNA (561bp) protein (187aa)
seg (db=Seg db_id=seg from=68 to=82)
coiled-coil (db=Coil db_id=coil from=41 to=69 evalue=NA)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_89_8
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(5363..5593)
DNA (231bp) protein (77aa)
5363..5593 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=GWA2_PER_44_7
Displaying 8 items

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