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ACD28_162

Alias: ACD28_475819.2946.5

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_162_1
R_Peregrinibacteria_48_14, Peregrinibacteria, Bacteria

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comp(2..1060)
DNA (1059bp) protein (353aa)
seg (db=Seg db_id=seg from=7 to=15)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=17 to=297 evalue=1.2e-23)
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=27 to=162 evalue=9.7e-11)
SBP_bac_1 (db=HMMPfam db_id=PF01547 from=45 to=291 evalue=3.8e-07 interpro_id=IPR006059 interpro_description=Bacterial extracellular solute-binding, family 1 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
ACD28_162_2

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comp(1083..1997)
DNA (915bp) protein (305aa)
cell wall biosynthesis glycosyltransferase
seg (db=Seg db_id=seg from=251 to=257)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=297 evalue=1.5e-52)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=3 to=213 evalue=3.8e-40)
ACD28_162_3

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comp(2417..2647)
DNA (231bp) protein (77aa)
2417..2647 - (rbs_motif=TAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD92962.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_162_4

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comp(2759..2980)
DNA (222bp) protein (74aa)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=43 evalue=1.6e-09 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
SSB (db=HMMPfam db_id=PF00436 from=2 to=40 evalue=2.5e-08 interpro_id=IPR000424 interpro_description=Primosome PriB/single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697))
SINGLE-STRANDED DNA-BINDING PROTEIN, SSB (db=HMMPanther db_id=PTHR10302 from=2 to=37 evalue=1.3e-07 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=49 evalue=6.4e-06 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
Displaying 4 items

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