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ACD28_194

Alias: ACD28_90527.4368.7

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_194_1
GWC1_OD1_45_14, Parcubacteria, Bacteria

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3..506
DNA (504bp) protein (168aa)
glycosyl hydrolase
BNR/Asp-box repeat domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZCR4_9BACT (db=UNIREF evalue=9.0e-12 bit_score=72.8 identity=32.07 coverage=98.2142857142857)
Oligoxyloglucan reducing end-specific cellobiohydrolase (db=superfamily db_id=SSF110296 from=8 to=163 evalue=2.7e-21)
no description (db=Gene3D db_id=G3DSA:2.130.10.140 from=12 to=140 evalue=8.0e-17)
ACD28_194_2
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

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870..1139
DNA (270bp) protein (90aa)
ribosome recycling factor
coiled-coil (db=Coil db_id=coil from=29 to=50 evalue=NA)
seg (db=Seg db_id=seg from=73 to=84)
coiled-coil (db=Coil db_id=coil from=61 to=89 evalue=NA)
ACD28_194_3
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

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1261..2391
DNA (1131bp) protein (377aa)
membrane-associated zinc metalloprotease
Membrane-associated zinc metalloprotease n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIV1_9FIRM (db=UNIREF evalue=3.0e-43 bit_score=179.0 identity=34.75 coverage=84.3501326259947)
transmembrane_regions (db=TMHMM db_id=tmhmm from=276 to=298)
transmembrane_regions (db=TMHMM db_id=tmhmm from=242 to=261)
ACD28_194_4
GWC2_OD1-i_45_10, Moranbacteria, Parcubacteria, Bacteria

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2506..2961
DNA (456bp) protein (152aa)
greA; transcription elongation factor GreA
Transcription elongation factor n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S2G6_9FIRM (db=UNIREF evalue=8.0e-32 bit_score=139.0 identity=51.33 coverage=96.0526315789474)
coiled-coil (db=Coil db_id=coil from=47 to=68 evalue=NA)
coiled-coil (db=Coil db_id=coil from=7 to=35 evalue=NA)
ACD28_194_5
GWC1_OD1_45_14, Parcubacteria, Bacteria

Not on your lists

3202..4401
DNA (1200bp) protein (400aa)
Lysyl-tRNA synthetase n=2 Tax=Bacillus pumilus RepID=A8F949_BACP2 (db=UNIREF evalue=1.0e-91 bit_score=340.0 identity=42.39 coverage=98.25)
lysyl-tRNA synthetase
lysyl-tRNA synthetase
ASPARTYL/LYSYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR22594 from=115 to=397 evalue=1.5e-90 interpro_id=IPR018150 interpro_description=Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:00
Displaying 5 items

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