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ACD28_1_3

Organism: ACD28

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38
Location: comp(1986..2321)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal_S30AE (db=HMMPfam db_id=PF02482 from=17 to=104 evalue=6.0e-10 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.00e-10
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=1 to=110 evalue=4.4e-09 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-09
yfiA: ribosomal subunit interface protein (db=HMMTigr db_id=TIGR00741 from=2 to=110 evalue=2.2e-08 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-08

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 336
ATGCAGGTGATCACATTCACGAAAAAATTGACCGATTTGGAAAAGGAGCTGTTTGAGAGTTATTTAAAAACAAAACTCGGCCGGATTGAAAAATATTGCCACGAGTTTGATGATGATGCGGTGAAGCTCAGCATCACCGCAGAGCGGTTCACCAATAAAAATGCCTATCGGGTGGATATGTGTATGGAGCTACCCAAGGCCGCCCACAAGGCGCTTTATTCCACCGAAGACAGCCATGATTTGCGTACGGCCATCGATTCGTCCAAGGAAAAATTAGTGGAACAGATTAAAAAAGCCATGGATAAACTTCATCATGAACACCAAAGAGCGACTTGA
PROTEIN sequence
Length: 112
MQVITFTKKLTDLEKELFESYLKTKLGRIEKYCHEFDDDAVKLSITAERFTNKNAYRVDMCMELPKAAHKALYSTEDSHDLRTAIDSSKEKLVEQIKKAMDKLHHEHQRAT*