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ACD28_1

Alias: ACD28_13809.4867.10

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_1_1

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comp(2..1054)
DNA (1053bp) protein (351aa)
cysteine desulfurase
seg (db=Seg db_id=seg from=333 to=349)
CYSTEINE DESULFURYLASE (db=HMMPanther db_id=PTHR11601 from=163 to=330 evalue=1.9e-60)
no description (db=Gene3D db_id=G3DSA:3.40.640.10 from=164 to=330 evalue=2.4e-55 interpro_id=IPR015421 interpro_description=Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ACD28_1_2

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comp(1144..1941)
DNA (798bp) protein (266aa)
hypothetical protein
hypothetical protein alias=ACD28_C00001G00002,ACD28_13809.4867.10G0002,ACD28_13809.4867.10_2 id=30727 tax=ACD28 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes organism_group=PER organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:EKD93850.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_1_3

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comp(1986..2321)
DNA (336bp) protein (112aa)
Ribosomal_S30AE (db=HMMPfam db_id=PF02482 from=17 to=104 evalue=6.0e-10 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=1 to=110 evalue=4.4e-09 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
yfiA: ribosomal subunit interface protein (db=HMMTigr db_id=TIGR00741 from=2 to=110 evalue=2.2e-08 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
no description (db=Gene3D db_id=G3DSA:3.30.160.100 from=1 to=109 evalue=0.00062 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
ACD28_1_4

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2437..3549
DNA (1113bp) protein (371aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D532_9BACT (db=UNIREF evalue=2.0e-70 bit_score=270.0 identity=44.13 coverage=87.3315363881402)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=201 to=212 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
DUF1730 (db=HMMPfam db_id=PF08331 from=59 to=142 evalue=6.4e-21 interpro_id=IPR013542 interpro_description=Domain of unknown function DUF1730)
ACD28_1_5

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3705..4520
DNA (816bp) protein (272aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD93853.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_1_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(4572..4904)
DNA (333bp) protein (111aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
seg (db=Seg db_id=seg from=15 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Displaying 6 items

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