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ACD28_21_13

Organism: ACD28

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38
Location: comp(12391..13260)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 295.0
  • Bit_score: 223
  • Evalue 9.80e-56
TruB: tRNA pseudouridine synthase B (db=HMMTigr db_id=TIGR00431 from=7 to=216 evalue=4.4e-83 interpro_id=IPR014780 interpro_description=Pseudouridine synthase II, TruB, N-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.40e-83
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=5 to=253 evalue=2.9e-74 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.90e-74

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Taxonomy

GWA2_PER_44_7 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGAATATTTTAGGCTCATCCAACGGCTTTCTCGTGGTCGATAAGCCTACGGGTTATACCTCGTTCGATATGGTGGCTCGCGCCCGTCGTGCTTTTGGAATCAAAAAAATAGGCCATTTGGGAACACTGGATCCTTTGGCGACCGGGGCATTGGTCTTGGCGCTCGGGGAAGCCACCAAGCTCATTGAATACCTCATGAAGGCGGATAAGGTGTATGAGGCTCGATTTGAATTGGGGAAGGTGAGTGACACCTACGACCGAGATGGGAGTATTCAGGTGGTGGACCCTGCTCCAATGGTTTCTTTGTCTCAACTCCAGCCCCTCCTGGAAGTATTCTTGGGGGAAATTCAGCAAACGCCCCCTATTTTTTCGGCCATAAAAGTTCAGGGGCAGCGTGCGTATGCCTTGGCTCGTGCCGGGGAGTCCGTGGTCTTGAAACCTCGCTTGGTTTCCGTTCATTCCATTGAGATTTTACGTTTTGAATTGCCTTTTGTGGAGCTCCGTATCCATTGCGGCAGTGGAACTTATATTCGTTCTTTGATTCATGATGTCGGACAACGTTTGGGCTGTGGTGCCCTCATGACGGAGTTGCGACGTTTGTCCGTGGGATCTTTTTCGCTCGGGCAGTCGGTTCCGGAGGAGAATTGGCCTTGTGACTTGGTTTCCCTTGAGGCGATCGTTCGGGAGTGGCCTTCGGTTGCGATTACCGAGGCGCAGTGGGCTGCTTTGTGGCAGGGAAAGGAAATCTCAGTTTTAGAGCCTCCTGATTCGGAGGGTTTCCCTCTCGCTGTTTTTCATGAAGGGCATTTAGTGAGTGTGGGACGAATGGCGGGTTCTTTGTTGCGCCCGGTGAAAAATTTTAAAGTTTGA
PROTEIN sequence
Length: 290
MNILGSSNGFLVVDKPTGYTSFDMVARARRAFGIKKIGHLGTLDPLATGALVLALGEATKLIEYLMKADKVYEARFELGKVSDTYDRDGSIQVVDPAPMVSLSQLQPLLEVFLGEIQQTPPIFSAIKVQGQRAYALARAGESVVLKPRLVSVHSIEILRFELPFVELRIHCGSGTYIRSLIHDVGQRLGCGALMTELRRLSVGSFSLGQSVPEENWPCDLVSLEAIVREWPSVAITEAQWAALWQGKEISVLEPPDSEGFPLAVFHEGHLVSVGRMAGSLLRPVKNFKV*