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ACD28_43_5

Organism: ACD28

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38
Location: 2460..3005

Top 3 Functional Annotations

Value Algorithm Source
transcription termination/antitermination factor NusG similarity KEGG
DB: KEGG
  • Identity: 59.9
  • Coverage: 172.0
  • Bit_score: 224
  • Evalue 2.80e-56
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=12 to=181 evalue=1.7e-73 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.70e-73

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Taxonomy

GWA2_PER_44_7 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGACCAAGCAAGCTAAAAATACCGGTAGAAACTGGTATGTCATTCACACCTACTCCGGCTATGAGGATGCGGTTCGCGAAGCACTGCTGCAGCGTATCGAGTCCATGAACATGCAGGAGAAAATTTTCGATGTGGTGGTTCCAACGGAAACTCAAATTGTGATTAAGAACGGAAAGCCAAAAACAGAAAAGAAGCGTCTTTTCCCCGGGTATGTCCTGGTCGACATGACCGTGGATGATGAATCCTGGTATGTGGTGCGAAATACTCCCAATGTCACCGGGTTCGTAGGCTCTGGCATTATTCCGGTTCCTGTTTCAGCCGAAGAATTCAAGGTGGTCCGACGTCATATGGGAGAAACCGATCCGAAATTCAAGATCGACTTCCAAATGAACGACCCTGTGATGGTCTTGGATGGACCTTTTGCCAACTACGATGGACTCATTCAAACGATTGATAAAGAAAAGGGTAAGGTCAAGGTTTTGATCACGATCTTCGGCCGTGAAACGCCCGTGGAACTTGATTTCACACAGATCAAAAAGAAATAA
PROTEIN sequence
Length: 182
MTKQAKNTGRNWYVIHTYSGYEDAVREALLQRIESMNMQEKIFDVVVPTETQIVIKNGKPKTEKKRLFPGYVLVDMTVDDESWYVVRNTPNVTGFVGSGIIPVPVSAEEFKVVRRHMGETDPKFKIDFQMNDPVMVLDGPFANYDGLIQTIDKEKGKVKVLITIFGRETPVELDFTQIKKK*