Alias: ACD28_6138.3140.11
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD28_43_1
unknown
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Not on your lists |
comp(1..63)
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1..63 - (rbs_motif=TAA rbs_spacer=3bp)
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ACD28_43_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(131..1057)
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seg (db=Seg db_id=seg from=5 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=280 to=302)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
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ACD28_43_3
GWA2_PER_44_7, Peregrinibacteria, Bacteria
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Not on your lists |
comp(1061..2032)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=297 to=319)
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
transmembrane_regions (db=TMHMM db_id=tmhmm from=204 to=226)
transmembrane_regions (db=TMHMM db_id=tmhmm from=161 to=183)
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ACD28_43_4
uncultured bacterium, Bacteria
|
Not on your lists |
2231..2449
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
SECE_SEC61G (db=PatternScan db_id=PS01067 from=10 to=38 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
SecE (db=HMMPfam db_id=PF00584 from=8 to=61 evalue=1.1e-21 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
secE_bact: preprotein translocase, SecE sub (db=HMMTigr db_id=TIGR00964 from=7 to=63 evalue=9.4e-21 interpro_id=IPR005807 interpro_description=SecE subunit of protein translocation complex GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
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ACD28_43_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria
|
Not on your lists |
2460..3005
|
transcription termination/antitermination factor NusG
NUSG (db=PatternScan db_id=PS01014 from=164 to=173 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=12 to=181 evalue=1.7e-73 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=9 to=117 evalue=3.3e-39 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
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