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ACD28_177_4

Organism: ACD28

near complete RP 49 / 55 MC: 12 BSCG 45 / 51 MC: 2 ASCG 0 / 38
Location: 3027..3524

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Pili subunits (db=superfamily db_id=SSF54523 from=1 to=111 evalue=5.7e-16) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.70e-16
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=1 to=21 evalue=0.034 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.40e-02

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Taxonomy

GWA2_PER_44_7 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGACGCTCATTGAGTTGCTGGTTGTGATGGGTGTCATTGGTATTCTGATGACGGTTTCGATCGGCGGCATTTCCAAAAGCCGGCAGCAGGCTCGTTTTAAAGAAGCGGTGAATACGGTGGTGGGGTTCATTCAAGGAGCGCGCAGTCGAGCTCTAAGCAATTTGAGTATGAACATTGGAGGAATTGATTATTCCGCCGATGCTTTTTATCTTCAGATCAATTCGCAAACCAATGAATTGAATTTATATGCCGATTTCAACGGCACGAATGATCAACTTTTGGAACATCAGACCTTAGACCCTTCGGTTCAAATCACACCCAATCCCTCCGATCTCGATCGCATGGTGTATTTCGCGCCGATGGGAGAGTTGGAGTTTTTCTACACCGACGGAAGTCCCGATAATGAAATCACCTTAACGCTCACCAGTCCGGGAAATCCTTTTGAACAAAAAATATTTTTATCCGAAGTTGGACGGGTTCCGGAATTGGTGAAATAG
PROTEIN sequence
Length: 166
MTLIELLVVMGVIGILMTVSIGGISKSRQQARFKEAVNTVVGFIQGARSRALSNLSMNIGGIDYSADAFYLQINSQTNELNLYADFNGTNDQLLEHQTLDPSVQITPNPSDLDRMVYFAPMGELEFFYTDGSPDNEITLTLTSPGNPFEQKIFLSEVGRVPELVK*