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ACD28_177

Alias: ACD28_72374.8781.10

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD28_177_1
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(149..730)
DNA (582bp) protein (194aa)
seg (db=Seg db_id=seg from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=10 to=30 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Pili subunits (db=superfamily db_id=SSF54523 from=12 to=73 evalue=1.1e-20)
ACD28_177_2
GWA2_PER_44_7, Peregrinibacteria, Bacteria

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comp(817..1395)
DNA (579bp) protein (193aa)
seg (db=Seg db_id=seg from=17 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=14 to=34 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Pili subunits (db=superfamily db_id=SSF54523 from=16 to=83 evalue=1.3e-23)
ACD28_177_3

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1600..2952
DNA (1353bp) protein (451aa)
seg (db=Seg db_id=seg from=264 to=280)
seg (db=Seg db_id=seg from=113 to=125)
Uncharacterized protein {ECO:0000313|EMBL:EKD92668.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_177_4
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3027..3524
DNA (498bp) protein (166aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
Pili subunits (db=superfamily db_id=SSF54523 from=1 to=111 evalue=5.7e-16)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=1 to=21 evalue=0.034 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_177_5
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

3539..4726
DNA (1188bp) protein (396aa)
MGT family glycosyltransferase
seg (db=Seg db_id=seg from=376 to=390)
MGT: glycosyltransferase, MGT family (db=HMMTigr db_id=TIGR01426 from=7 to=395 evalue=2.6e-94 interpro_id=IPR006326 interpro_description=UDP-glycosyltransferase, MGT GO=Molecular Function: transferase activity, transferring hexosyl groups (GO:0016758), Biological Process: antibiotic metabolic process (GO:0016999))
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=392 evalue=8.1e-74)
ACD28_177_6
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(4715..5878)
DNA (1164bp) protein (388aa)
seg (db=Seg db_id=seg from=7 to=17)
hypothetical protein Tax=GWA2_PER_44_7
ACD28_177_7
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(6224..6751)
DNA (528bp) protein (176aa)
Type 4 fimbrial assembly protein pilC n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MMG2_9BACT (db=UNIREF evalue=8.0e-35 bit_score=149.0 identity=42.2 coverage=97.1590909090909)
type II secretion system protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=166)
GSPII_F (db=HMMPfam db_id=PF00482 from=41 to=164 evalue=4.5e-27 interpro_id=IPR018076 interpro_description=Type II secretion system F domain)
ACD28_177_8

Not on your lists

7090..7659
DNA (570bp) protein (190aa)
7090..7659 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD92663.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD28_177_9

Not on your lists

comp(7518..8819)
DNA (1302bp) protein (434aa)
type II secretion system protein E (GspE)
seg (db=Seg db_id=seg from=174 to=185)
seg (db=Seg db_id=seg from=148 to=161)
seg (db=Seg db_id=seg from=1 to=16)
Displaying 9 items

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