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ACD2_21

Alias: ACD2_2133.124783.59

Search features with annotation key words

Displaying items 61-90 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_21_61
ACD2, Gracilibacteria, Bacteria

Not on your lists

69138..70643
DNA (1506bp) protein (502aa)
coiled-coil (db=Coil db_id=coil from=210 to=231 evalue=NA)
seg (db=Seg db_id=seg from=213 to=231)
coiled-coil 210..231 Tax=ACD2
ACD2_21_62
ACD2, Gracilibacteria, Bacteria

Not on your lists

70656..72317
DNA (1662bp) protein (554aa)
70656..72317 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_21_63
ACD2, Gracilibacteria, Bacteria

Not on your lists

72356..74137
DNA (1782bp) protein (594aa)
seg (db=Seg db_id=seg from=156 to=167)
seg (db=Seg db_id=seg from=374 to=389)
seg 156..167 Tax=ACD2
ACD2_21_64
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(74441..75196)
DNA (756bp) protein (252aa)
hypothetical protein (db=KEGG evalue=5.0e-09 bit_score=64.7 identity=31.17 coverage=55.5555555555556)
hypothetical protein alias=ACD2_C00021G00064,ACD2_2133.124783.59G0064,ACD2_2133.124783.59_64 id=34742 tax=ACD2 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD2
ACD2_21_65
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(75178..75678)
DNA (501bp) protein (167aa)
dnaG; DNA primase (EC:2.7.7.-)
seg (db=Seg db_id=seg from=90 to=99)
zf-CHC2 (db=HMMPfam db_id=PF01807 from=2 to=88 evalue=6.0e-21 interpro_id=IPR002694 interpro_description=Zinc finger, CHC2-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication (GO:0006260), Molecular Function: zinc ion binding (GO:0008270))
Zinc beta-ribbon (db=superfamily db_id=SSF57783 from=2 to=92 evalue=5.1e-20)
ACD2_21_66
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(75937..76077)
DNA (141bp) protein (47aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions 21..43 Tax=ACD2
ACD2_21_67
ACD2, Gracilibacteria, Bacteria

Not on your lists

76128..76898
DNA (771bp) protein (257aa)
seg (db=Seg db_id=seg from=245 to=256)
seg 245..256 Tax=ACD2
ACD2_21_68
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(76899..77351)
DNA (453bp) protein (151aa)
PBP family phospholipid-binding protein
PEBP-like (db=superfamily db_id=SSF49777 from=4 to=150 evalue=2.6e-34 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
no description (db=Gene3D db_id=G3DSA:3.90.280.10 from=5 to=147 evalue=3.1e-30 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
PBP (db=HMMPfam db_id=PF01161 from=20 to=146 evalue=2.2e-24 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
ACD2_21_69
ACD2, Gracilibacteria, Bacteria

Not on your lists

77818..78144
DNA (327bp) protein (109aa)
77818..78144 + (rbs_motif=TAA rbs_spacer=4bp)
hypothetical protein Tax=ACD2
ACD2_21_70
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(78141..79010)
DNA (870bp) protein (290aa)
seg (db=Seg db_id=seg from=112 to=124)
seg 112..124 Tax=ACD2
ACD2_21_71
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(79976..80497)
DNA (522bp) protein (174aa)
seg (db=Seg db_id=seg from=150 to=168)
seg (db=Seg db_id=seg from=52 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=169)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=140)
ACD2_21_72
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(80612..82501)
DNA (1890bp) protein (630aa)
Chaperone protein dnaK n=1 Tax=Bdellovibrio bacteriovorus RepID=DNAK_BDEBA (db=UNIREF evalue=0.0 bit_score=687.0 identity=58.1 coverage=96.3492063492064)
chaperone protein DnaK
chaperone protein DnaK
chaperone protein DnaK
ACD2_21_73
ACD2, Gracilibacteria, Bacteria

Not on your lists

82726..83340
DNA (615bp) protein (205aa)
82726..83340 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_21_74
ACD2, Gracilibacteria, Bacteria

Not on your lists

83595..84098
DNA (504bp) protein (168aa)
seg (db=Seg db_id=seg from=97 to=107)
seg 97..107 Tax=ACD2
ACD2_21_75
ACD2, Gracilibacteria, Bacteria

Not on your lists

84459..85451
DNA (993bp) protein (331aa)
Thiamine biosynthesis protein-like protein
seg (db=Seg db_id=seg from=292 to=312)
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=1 to=243 evalue=1.2e-26)
ThiI (db=HMMPfam db_id=PF02568 from=1 to=145 evalue=3.4e-14 interpro_id=IPR020536 interpro_description=Thiamine biosynthesis protein, C-terminal GO=Molecular Function: RNA binding (GO:0003723), Cellular Component: cytoplasm (GO:0005737), Biological Process: thiamin biosynthetic process (GO:0009228))
ACD2_21_76
ACD2, Gracilibacteria, Bacteria

Not on your lists

85757..86158
DNA (402bp) protein (134aa)
DUF3170 (db=HMMPfam db_id=PF11370 from=15 to=133 evalue=9.2e-06 interpro_id=IPR021510 interpro_description=Protein of unknown function DUF3170)
DUF3170 Tax=ACD2
ACD2_21_77
unknown

Not on your lists

86258..87142
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SL29_9RHOB (db=UNIREF evalue=3.0e-12 bit_score=76.3 identity=27.27 coverage=97.9661016949153)
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=185)
ACD2_21_78
ACD2, Gracilibacteria, Bacteria

Not on your lists

87150..87785
DNA (636bp) protein (212aa)
hypothetical protein (db=KEGG evalue=5.0e-26 bit_score=120.0 identity=44.81 coverage=83.0188679245283)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
ACD2_21_79
ACD2, Gracilibacteria, Bacteria

Not on your lists

88378..92169
DNA (3792bp) protein (1264aa)
seg (db=Seg db_id=seg from=1110 to=1124)
seg (db=Seg db_id=seg from=1128 to=1137)
seg 1110..1124 Tax=ACD2
ACD2_21_80

Not on your lists

92616..93731
DNA (1116bp) protein (372aa)
Glycosyltransferase
seg (db=Seg db_id=seg from=218 to=229)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=370 evalue=1.7e-53)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=2 to=370 evalue=1.7e-53)
ACD2_21_81
unknown

Not on your lists

93733..94344
DNA (612bp) protein (204aa)
Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein n=1 Tax=Bermanella marisrubri RepID=Q1MXZ0_9GAMM (db=UNIREF evalue=1.0e-43 bit_score=179.0 identity=47.47 coverage=96.078431372549)
phosphoserine phosphatase (EC:2.7.1.39)
no description (db=Gene3D db_id=G3DSA:3.90.1470.10 from=4 to=131 evalue=2.9e-26)
HAD-like (db=superfamily db_id=SSF56784 from=4 to=201 evalue=1.6e-23)
makes serine Jill Banfield (11/15/12)
phosphoserine-serine Jill Banfield (11/15/12)
ACD2_21_82

Not on your lists

94352..95521
DNA (1170bp) protein (390aa)
seg (db=Seg db_id=seg from=239 to=250)
seg (db=Seg db_id=seg from=163 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=340 to=362)
transmembrane_regions (db=TMHMM db_id=tmhmm from=314 to=336)
ACD2_21_83
ACD2, Gracilibacteria, Bacteria

Not on your lists

95586..96365
DNA (780bp) protein (260aa)
seg (db=Seg db_id=seg from=133 to=143)
seg 133..143 Tax=ACD2
ACD2_21_84
ACD2, Gracilibacteria, Bacteria

Not on your lists

96776..97483
DNA (708bp) protein (236aa)
ankyrin repeat protein (db=KEGG evalue=6.0e-17 bit_score=90.9 identity=34.42 coverage=62.7118644067797)
Ankyrin repeat (db=superfamily db_id=SSF48403 from=56 to=221 evalue=2.8e-24 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
no description (db=Gene3D db_id=G3DSA:1.25.40.20 from=49 to=213 evalue=1.4e-20 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
ANKYRIN REPEAT-CONTAINING (db=HMMPanther db_id=PTHR18958 from=68 to=213 evalue=7.9e-17)
ACD2_21_85
ACD2, Gracilibacteria, Bacteria

Not on your lists

97709..98107
DNA (399bp) protein (133aa)
seg (db=Seg db_id=seg from=92 to=107)
coiled-coil (db=Coil db_id=coil from=21 to=42 evalue=NA)
coiled-coil 21..42 Tax=ACD2
ACD2_21_86
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(98154..98735)
DNA (582bp) protein (194aa)
98154..98735 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_21_87
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(98746..100671)
DNA (1926bp) protein (642aa)
seg (db=Seg db_id=seg from=598 to=614)
seg 598..614 Tax=ACD2
ACD2_21_88
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(100820..101383)
DNA (564bp) protein (188aa)
100820..101383 - (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD2
ACD2_21_89
ACD2, Gracilibacteria, Bacteria

Not on your lists

101916..104450
DNA (2535bp) protein (845aa)
seg (db=Seg db_id=seg from=389 to=411)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=39)
coiled-coil (db=Coil db_id=coil from=422 to=457 evalue=NA)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=699 to=844 evalue=5.7e-10)
ACD2_21_90
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(104455..105057)
DNA (603bp) protein (201aa)
104455..105057 - (rbs_motif=TAAA rbs_spacer=6bp)
hypothetical protein Tax=ACD2
Displaying items 61-90 of 108 in total

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