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ACD2_21

Alias: ACD2_2133.124783.59

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_21_1
unknown

Not on your lists

156..1892
DNA (1737bp) protein (579aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6Q9_9FIRM (db=UNIREF evalue=3.0e-52 bit_score=210.0 identity=37.42 coverage=51.6407599309154)
transmembrane_regions (db=TMHMM db_id=tmhmm from=246 to=268)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD2_21_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

1951..2184
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=2 to=27)
coiled-coil (db=Coil db_id=coil from=51 to=72 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
DUF2078 (db=HMMPfam db_id=PF09851 from=9 to=76 evalue=3.4e-18 interpro_id=IPR018649 interpro_description=Protein of unknown function DUF2078, membrane)
ACD2_21_3

Not on your lists

2218..2625
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PD68_9SPHN (db=UNIREF evalue=5.0e-08 bit_score=60.1 identity=30.08 coverage=94.8529411764706)
seg (db=Seg db_id=seg from=72 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
ACD2_21_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

2736..2951
DNA (216bp) protein (72aa)
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=62 evalue=1.6e-08 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA (db=HMMPfam db_id=PF00403 from=6 to=60 evalue=5.2e-06 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA_2 (db=ProfileScan db_id=PS50846 from=3 to=69 evalue=11.025 interpro_id=IPR006121 interpro_description=Heavy metal transport/detoxification protein GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain 1..62 Tax=ACD2
ACD2_21_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

2977..6402
DNA (3426bp) protein (1142aa)
hypothetical protein
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense Y51 RepID=Q24NU3_DESHY (db=UNIREF evalue=4.0e-177 bit_score=626.0 identity=42.38 coverage=68.3012259194396)
ACD2_21_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(7337..8335)
DNA (999bp) protein (333aa)
7337..8335 - (rbs_motif=TAA rbs_spacer=3bp)
hypothetical protein Tax=ACD2
ACD2_21_7
unknown

Not on your lists

8474..9751
DNA (1278bp) protein (426aa)
Sensor protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4B3_9DELT (db=UNIREF evalue=4.0e-20 bit_score=103.0 identity=26.4 coverage=56.3380281690141)
subtilin biosynthesis sensor protein SpaK (EC:2.7.13.3)
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=8 to=413 evalue=1.5e-15)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=247 to=425 evalue=2.1e-12 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
ACD2_21_8
ACD2, Gracilibacteria, Bacteria

Not on your lists

10094..10582
DNA (489bp) protein (163aa)
10094..10582 + (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
ACD2_21_9
ACD2, Gracilibacteria, Bacteria

Not on your lists

10593..11981
DNA (1389bp) protein (463aa)
seg (db=Seg db_id=seg from=203 to=216)
seg (db=Seg db_id=seg from=154 to=192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=76 to=93)
coiled-coil (db=Coil db_id=coil from=129 to=174 evalue=NA)
ACD2_21_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

12004..12261
DNA (258bp) protein (86aa)
12004..12261 + (rbs_motif=AAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_21_11
ACD2, Gracilibacteria, Bacteria

Not on your lists

12503..14917
DNA (2415bp) protein (805aa)
seg (db=Seg db_id=seg from=781 to=794)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions 58..80 Tax=ACD2
ACD2_21_12
ACD2, Gracilibacteria, Bacteria

Not on your lists

15059..16027
DNA (969bp) protein (323aa)
UBA/THIF-type NAD/FAD binding protein
seg (db=Seg db_id=seg from=70 to=84)
Activating enzymes of the ubiquitin-like proteins (db=superfamily db_id=SSF69572 from=74 to=322 evalue=1.5e-23 interpro_id=IPR009036 interpro_description=Molybdenum cofactor biosynthesis, MoeB)
ThiF (db=HMMPfam db_id=PF00899 from=74 to=199 evalue=1.1e-19 interpro_id=IPR000594 interpro_description=UBA/THIF-type NAD/FAD binding fold GO=Molecular Function: catalytic activity (GO:0003824))
ACD2_21_13
ACD2, Gracilibacteria, Bacteria

Not on your lists

16041..16235
DNA (195bp) protein (65aa)
seg (db=Seg db_id=seg from=6 to=19)
seg 6..19 Tax=ACD2
ACD2_21_14
ACD2, Gracilibacteria, Bacteria

Not on your lists

17112..17339
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
seg (db=Seg db_id=seg from=5 to=17)
transmembrane_regions 17..39 Tax=ACD2
ACD2_21_15
unknown

Not on your lists

comp(17336..18043)
DNA (708bp) protein (236aa)
Alpha/beta hydrolase, putative n=1 Tax=Aspergillus fumigatus A1163 RepID=B0Y062_ASPFC (db=UNIREF evalue=5.0e-15 bit_score=84.7 identity=25.95 coverage=97.8813559322034)
hypothetical protein (db=KEGG evalue=5.0e-11 bit_score=71.2 identity=25.44 coverage=83.8983050847458)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=6 to=234 evalue=3.2e-15)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=12 to=232 evalue=8.1e-09)
ACD2_21_16
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(18036..18986)
DNA (951bp) protein (317aa)
seg (db=Seg db_id=seg from=8 to=21)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=43 to=239 evalue=2.5e-06 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
APH (db=HMMPfam db_id=PF01636 from=144 to=227 evalue=3.7e-05 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
seg 8..21 Tax=ACD2
ACD2_21_17

Not on your lists

comp(19002..19976)
DNA (975bp) protein (325aa)
ABC transporter
seg (db=Seg db_id=seg from=305 to=322)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=266 evalue=6.1e-66)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF16 from=5 to=266 evalue=6.1e-66)
ACD2_21_18
unknown

Not on your lists

comp(19979..20761)
DNA (783bp) protein (261aa)
hypothetical protein Plarl_01353 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169423B (db=UNIREF evalue=6.0e-14 bit_score=81.6 identity=26.51 coverage=93.8697318007663)
hypothetical protein (db=KEGG evalue=8.0e-14 bit_score=80.9 identity=26.32 coverage=93.4865900383142)
seg (db=Seg db_id=seg from=142 to=155)
transmembrane_regions (db=TMHMM db_id=tmhmm from=223 to=242)
ACD2_21_19
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(20762..21553)
DNA (792bp) protein (264aa)
protein of unknown function DUF990 (db=KEGG evalue=5.0e-20 bit_score=101.0 identity=24.52 coverage=98.1060606060606)
transmembrane_regions (db=TMHMM db_id=tmhmm from=229 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=167)
ACD2_21_20
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(21594..22169)
DNA (576bp) protein (192aa)
21594..22169 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
ACD2_21_21
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(22244..23638)
DNA (1395bp) protein (465aa)
peptidase M20C, Xaa-His dipeptidase
PEPTIDASE M20 FAMILY MEMBER (db=HMMPanther db_id=PTHR11014 from=1 to=464 evalue=3.2e-68)
AMINOACYL-HISTIDINE PEPTIDASE (db=HMMPanther db_id=PTHR11014:SF2 from=1 to=464 evalue=3.2e-68 interpro_id=IPR001160 interpro_description=Peptidase M20C, Xaa-His dipeptidase GO=Biological Process: proteolysis (GO:0006508))
no description (db=Gene3D db_id=G3DSA:3.40.630.10 from=6 to=461 evalue=1.6e-40)
ACD2_21_22
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(23755..24051)
DNA (297bp) protein (99aa)
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
seg (db=Seg db_id=seg from=1 to=12)
coiled-coil 1..22 Tax=ACD2
ACD2_21_23
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(24224..26557)
DNA (2334bp) protein (778aa)
Penicillin-binding protein, transpeptidase protein
seg (db=Seg db_id=seg from=35 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=365 to=777 evalue=5.7e-68 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
ACD2_21_24
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(26557..27414)
DNA (858bp) protein (286aa)
26557..27414 - (rbs_motif=AAA rbs_spacer=7bp)
hypothetical protein Tax=ACD2
ACD2_21_25
ACD2, Gracilibacteria, Bacteria

Not on your lists

27548..28669
DNA (1122bp) protein (374aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=7 to=27 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
Pili subunits (db=superfamily db_id=SSF54523 from=9 to=153 evalue=5.8e-06)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=6 to=29 evalue=0.00018 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD2_21_26
ACD2, Gracilibacteria, Bacteria

Not on your lists

28671..29630
DNA (960bp) protein (320aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=12 to=27)
transmembrane_regions 9..31 Tax=ACD2
ACD2_21_27

Not on your lists

29632..30600
DNA (969bp) protein (323aa)
hypothetical protein
CofD-like (db=superfamily db_id=SSF142338 from=1 to=315 evalue=4.6e-70)
CofD_related: conserved hypothetical pro (db=HMMTigr db_id=TIGR01826 from=5 to=318 evalue=2.0e-61 interpro_id=IPR010119 interpro_description=Uncharacterised protein family UPF0052)
UPF0052 (db=HMMPfam db_id=PF01933 from=18 to=297 evalue=1.5e-54 interpro_id=IPR002882 interpro_description=LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052)
ACD2_21_28
ACD2, Gracilibacteria, Bacteria

Not on your lists

30612..31139
DNA (528bp) protein (176aa)
coiled-coil (db=Coil db_id=coil from=40 to=61 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
seg (db=Seg db_id=seg from=126 to=137)
coiled-coil 40..61 Tax=ACD2
ACD2_21_29
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(31141..31350)
DNA (210bp) protein (70aa)
seg (db=Seg db_id=seg from=17 to=26)
seg (db=Seg db_id=seg from=30 to=41)
seg 17..26 Tax=ACD2
ACD2_21_30
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(31428..31787)
DNA (360bp) protein (120aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
transmembrane_regions 55..77 Tax=ACD2
Displaying items 1-30 of 108 in total

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