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ACD2_57

Alias: ACD2p_2901.10223.62

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_57_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(222..641)
DNA (420bp) protein (140aa)
cyclic AMP receptor protein,catabolite gene activator (db=KEGG evalue=3.0e-09 bit_score=63.9 identity=37.04 coverage=54.2857142857143)
seg (db=Seg db_id=seg from=117 to=130)
cAMP-binding domain-like (db=superfamily db_id=SSF51206 from=1 to=132 evalue=4.5e-15 interpro_id=IPR018490 interpro_description=Cyclic nucleotide-binding-like)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=1 to=132 evalue=1.1e-11 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD2_57_2
unknown

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comp(659..3112)
DNA (2454bp) protein (818aa)
Translation initiation factor IF-2 n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CNN8_9FIRM (db=UNIREF evalue=4.0e-130 bit_score=469.0 identity=40.36 coverage=78.9731051344743)
translation initiation factor IF-2
seg (db=Seg db_id=seg from=110 to=123)
seg (db=Seg db_id=seg from=85 to=105)
ACD2_57_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(3321..3890)
DNA (570bp) protein (190aa)
seg (db=Seg db_id=seg from=160 to=167)
fkbM_fam: methyltransferase, FkbM family (db=HMMTigr db_id=TIGR01444 from=8 to=147 evalue=1.5e-05 interpro_id=IPR006342 interpro_description=Methyltransferase FkbM)
seg 160..167 Tax=ACD2
ACD2_57_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(4037..4657)
DNA (621bp) protein (207aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=195)
seg (db=Seg db_id=seg from=16 to=29)
seg (db=Seg db_id=seg from=121 to=134)
ACD2_57_5
unknown

Not on your lists

comp(4657..5181)
DNA (525bp) protein (175aa)
ECF subfamily RNA polymerase sigma-24 subunit
Sigma-24, ECF subfamily protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G350_9DELT (db=UNIREF evalue=1.0e-17 bit_score=92.4 identity=29.49 coverage=88.5714285714286)
seg (db=Seg db_id=seg from=162 to=174)
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=5 to=162 evalue=3.9e-25 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:001698
ACD2_57_6
unknown

Not on your lists

comp(5233..7794)
DNA (2562bp) protein (854aa)
NAD(+) ADP-ribosyltransferase
NAD(+) ADP-ribosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Displaying 6 items

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