Alias: ACD51_49472.18326.10
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD51_32_1
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
1..534
|
1..534 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
|
|
ACD51_32_2
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(531..1607)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=298 to=320)
transmembrane_regions (db=TMHMM db_id=tmhmm from=269 to=291)
transmembrane_regions (db=TMHMM db_id=tmhmm from=247 to=265)
transmembrane_regions (db=TMHMM db_id=tmhmm from=204 to=226)
|
|
ACD51_32_3
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
1639..2574
|
yfjQ; putative metal ion transporter YfjQ
seg (db=Seg db_id=seg from=166 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=254 to=276)
transmembrane_regions (db=TMHMM db_id=tmhmm from=286 to=305)
|
|
ACD51_32_4
uncultured bacterium, Bacteria
|
Not on your lists |
comp(2687..3178)
|
seg (db=Seg db_id=seg from=10 to=24)
seg (db=Seg db_id=seg from=30 to=43)
seg (db=Seg db_id=seg from=74 to=89)
seg (db=Seg db_id=seg from=113 to=125)
|
|
ACD51_32_5
uncultured bacterium, Bacteria
|
Not on your lists |
3342..3605
|
30S ribosomal protein S15
seg (db=Seg db_id=seg from=5 to=19)
RIBOSOMAL_S15 (db=PatternScan db_id=PS00362 from=37 to=67 evalue=0.0 interpro_id=IPR000589 interpro_description=Ribosomal protein S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S15_bact: ribosomal protein S15 (db=HMMTigr db_id=TIGR00952 from=2 to=87 evalue=8.3e-43 interpro_id=IPR005290 interpro_description=Ribosomal protein S15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
|
|
ACD51_32_6
uncultured bacterium, Bacteria
|
Not on your lists |
3832..5958
|
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Halothermothrix orenii H 168 RepID=PNP_HALOH (db=UNIREF evalue=0.0 bit_score=721.0 identity=50.49 coverage=98.7306064880113)
Polyribonucleotide nucleotidyltransferase (db=HMMPIR db_id=PIRSF005499 from=1 to=708 evalue=0.0 interpro_id=IPR012162 interpro_description=Polyribonucleotide nucleotidyltransferase GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: polyribonucleotide nucleotidyltransferase activity (GO:0004654), Cellular Component: mitochondrion (GO:0005739), Biological Process: mRNA catabolic process (GO:0006402))
|
|
ACD51_32_7
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
6247..7362
|
||
ACD51_32_8
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(7441..7896)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
transmembrane_regions 9..28 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
|
|
ACD51_32_9
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
8015..9514
|
lL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83); K10206 LL-diaminopimelate aminotransferase [EC:2.6.1.83] (db=KEGG evalue=6.0e-08 bit_score=62.8 identity=25.78 coverage=62.4)
seg (db=Seg db_id=seg from=488 to=498)
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=331 to=344 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=48 to=492 evalue=3.1e-20 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
|
lysine biosynthesis
Jill Banfield
(11/15/12)
|
ACD51_32_10
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(9744..10235)
|
hypothetical protein
Putative endo alpha-1,4 polygalactosaminidase n=1 Tax=uncultured bacterium RepID=Q20JY3_9BACT (db=UNIREF evalue=4.0e-52 bit_score=206.0 identity=56.52 coverage=97.5609756097561)
DUF297 (db=HMMPfam db_id=PF03537 from=3 to=128 evalue=4.4e-35 interpro_id=IPR004352 interpro_description=TM1410 hypothetical-related protein)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=4 to=160 evalue=3.6e-33 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
|
|
ACD51_32_11
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(10312..11262)
|
hypothetical protein
Possible S-layer protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BFU4_9BACI (db=UNIREF evalue=3.0e-13 bit_score=79.3 identity=28.24 coverage=49.211356466877)
seg (db=Seg db_id=seg from=271 to=288)
seg (db=Seg db_id=seg from=222 to=238)
|
|
ACD51_32_12
uncultured bacterium, Bacteria
|
Not on your lists |
11405..12364
|
seg (db=Seg db_id=seg from=4 to=14)
Sialidases (db=superfamily db_id=SSF50939 from=76 to=290 evalue=5.3e-17 interpro_id=IPR011040 interpro_description=Neuraminidase)
no description (db=Gene3D db_id=G3DSA:2.120.10.10 from=79 to=290 evalue=6.2e-05)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=16 evalue=6.0)
|
|
ACD51_32_13
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
12394..13554
|
seg (db=Seg db_id=seg from=27 to=39)
seg (db=Seg db_id=seg from=296 to=308)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=22 evalue=7.0)
seg 296..308 Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
|
|
ACD51_32_14
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(13523..14572)
|
Ketol-acid reductoisomerase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZNB4_9BACT (db=UNIREF evalue=3.0e-148 bit_score=528.0 identity=69.16 coverage=98.8571428571429)
ketol-acid reductoisomerase
ketol-acid reductoisomerase
SUBFAMILY NOT NAMED (db=HMMPanther db_id=PTHR21371:SF3 from=96 to=348 evalue=1.6e-150)
|
|
ACD51_32_15
uncultured bacterium, Bacteria
|
Not on your lists |
comp(14628..15005)
|
endoribonuclease L-PSP
UPF0076 (db=PatternScan db_id=PS01094 from=100 to=118 evalue=0.0 interpro_id=IPR019897 interpro_description=YjgF-like protein, conserved site)
TIGR00004: putative endoribonuclease L-PSP (db=HMMTigr db_id=TIGR00004 from=2 to=124 evalue=1.4e-82 interpro_id=IPR006056 interpro_description=YjgF-like protein)
TRANSLATION INITIATION INHIBITOR (db=HMMPanther db_id=PTHR11803 from=5 to=125 evalue=9.3e-51 interpro_id=IPR006175 interpro_description=Endoribonuclease L-PSP)
|
|
ACD51_32_16
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(15002..15454)
|
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
acolac_sm: acetolactate synthase, small sub (db=HMMTigr db_id=TIGR00119 from=1 to=149 evalue=2.0e-24 interpro_id=IPR004789 interpro_description=Acetolactate synthase, small subunit GO=Molecular Function: acetolactate synthase activity (GO:0003984), Biological Process: branched chain family amino acid biosynthetic process (GO:0009082))
ACT-like (db=superfamily db_id=SSF55021 from=1 to=77 evalue=6.4e-16)
Q4NFX9_9MICC_Q4NFX9; (db=BlastProDom db_id=PD002844 from=2 to=76 evalue=2.0e-12)
|
|
ACD51_32_17
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria
|
Not on your lists |
comp(15457..17130)
|
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
ilvB; acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase n=5 Tax=Dehalococcoides RepID=A5FR34_DEHSB (db=UNIREF evalue=1.0e-175 bit_score=620.0 identity=55.8 coverage=98.5663082437276)
seg (db=Seg db_id=seg from=53 to=66)
|
|
ACD51_32_18
uncultured bacterium, Bacteria
|
Not on your lists |
comp(17141..18364)
|
Dihydroxy-acid dehydratase n=2 Tax=environmental samples RepID=D1J9U5_9ARCH (db=UNIREF evalue=3.0e-137 bit_score=491.0 identity=64.89 coverage=95.8333333333333)
dihydroxyacid dehydratase (EC:4.2.1.9)
dihydroxyacid dehydratase (EC:4.2.1.9)
seg (db=Seg db_id=seg from=344 to=360)
|