ggKbase home page

ACD76_24

Alias: ACD76_111153.6822.16

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD76_24_1

Not on your lists

comp(219..1298)
DNA (1080bp) protein (360aa)
hypothetical protein
seg (db=Seg db_id=seg from=337 to=357)
seg (db=Seg db_id=seg from=198 to=220)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
ACD76_24_2

Not on your lists

comp(1258..1839)
DNA (582bp) protein (194aa)
ECF subfamily RNA polymerase sigma factor
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=20 to=178 evalue=7.0e-29 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=14 to=87 evalue=2.1e-13 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=110 to=180 evalue=6.8e-13 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD76_24_3

Not on your lists

2120..2410
DNA (291bp) protein (97aa)
2120..2410 + (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD33532.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD76_24_4

Not on your lists

2440..4443
DNA (2004bp) protein (668aa)
hypothetical protein GobsU_08082 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48ED (db=UNIREF evalue=7.0e-37 bit_score=159.0 identity=44.22 coverage=29.4910179640719)
hypothetical protein
seg (db=Seg db_id=seg from=433 to=444)
Integrin alpha N-terminal domain (db=superfamily db_id=SSF69318 from=399 to=658 evalue=2.5e-26)
ACD76_24_5

Not on your lists

4484..4786
DNA (303bp) protein (101aa)
DNA polymerase beta domain-containing protein region
Nucleotidyltransferase n=2 Tax=environmental samples RepID=Q64EA5_9ARCH (db=UNIREF evalue=1.0e-14 bit_score=82.4 identity=62.5 coverage=92.0792079207921)
seg (db=Seg db_id=seg from=51 to=72)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=2 to=92 evalue=6.2e-22)
ACD76_24_6

Not on your lists

4761..4964
DNA (204bp) protein (68aa)
coiled-coil (db=Coil db_id=coil from=37 to=58 evalue=NA)
UPF0150 (db=HMMPfam db_id=PF03681 from=6 to=46 evalue=6.0e-08 interpro_id=IPR005357 interpro_description=Uncharacterised protein family UPF0150)
TTHA1013-like (db=superfamily db_id=SSF143100 from=2 to=47 evalue=6.8e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKD33535.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD76_24_7

Not on your lists

4974..6809
DNA (1836bp) protein (612aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
seg (db=Seg db_id=seg from=51 to=61)
Uncharacterized protein {ECO:0000313|EMBL:EKD33536.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 7 items

View Taxonomy