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RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(426..581)
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(759..2219)
DNA (1461bp) protein (487aa)
RDD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RDD domain-containing protein id=12556265 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RDD domain-containing protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2216..2686)
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(2673..3233)
DNA (561bp) protein (187aa)
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ECF subfamily RNA polymerase sigma-24 factor id=12556267 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ECF subfamily RNA polymerase sigma-24 factor
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3428..3655
DNA (228bp) protein (76aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4026..4316
DNA (291bp) protein (97aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4443..5747
DNA (1305bp) protein (435aa)
Alcohol dehydrogenase (Fragment) n=1 Tax=Sphingomonas sp. NP5 RepID=C9K6B7_9SPHN
oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
oxidoreductase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5752..5937
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

6203..6826
DNA (624bp) protein (208aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7094..7855
DNA (762bp) protein (254aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555325 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
XRE family transcriptional regulator
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

7852..8910
DNA (1059bp) protein (353aa)
mechanosensitive ion channel protein MscS n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B500D8
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
mechanosensitive ion channel family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9229..9939
DNA (711bp) protein (237aa)
putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB (EC:2.4.1.15 3.1.3.12); K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] Tax=RIFCSPLOWO2_12_FUL
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HER2_ANADF
putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9997..11439
DNA (1443bp) protein (481aa)
Uncharacterized protein (Fragment) n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZET3_NODSP
sll1151; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sll1151; hypothetical protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11471..14401)
DNA (2931bp) protein (977aa)
alpha-amylase family protein; K06044 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Maltooligosyl trehalose synthase n=3 Tax=Anaeromyxobacter RepID=Q2IMN4_ANADE id=5225491 bin=16ft_combo_ws3_JS1 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
alpha-amylase family protein
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14405..16555)
DNA (2151bp) protein (717aa)
isoamylase; K02438 glycogen operon protein GlgX [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Isoamylase n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QWS6_ISOPI
isoamylase
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16594..17697)
DNA (1104bp) protein (368aa)
glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Dyella japonica RepID=UPI0002EDA265
ABC transporter; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17699..18511)
DNA (813bp) protein (271aa)
Maltose transport system permease protein MalG n=2 Tax=Thermosipho africanus RepID=B7IGU3_THEAB
maltose transporter permease MalG; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
maltose transporter permease MalG
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_rifcsplowo2_12_scaffold_11903_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18508..19194)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Cohnella laeviribosi RepID=UPI00037598E2
carbohydrate ABC transporter membrane protein 1, CUT1 family; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
carbohydrate ABC transporter membrane protein 1, CUT1 family
Displaying 19 items

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