ggKbase home page

ACD80_53

Alias: ACD80_10181.17780.22

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_53_1
ACD80, SR1, Bacteria

Not on your lists

comp(2..448)
DNA (447bp) protein (149aa)
seg (db=Seg db_id=seg from=120 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=30 evalue=5.0)
seg 120..141 Tax=ACD80
ACD80_53_2
unknown

Not on your lists

comp(607..2883)
DNA (2277bp) protein (759aa)
hep_Hag family protein
Hemagglutinin family protein n=3 Tax=Burkholderia pseudomallei RepID=A3NFN1_BURP6 (db=UNIREF evalue=5.0e-55 bit_score=220.0 identity=41.1 coverage=55.467720685112)
seg (db=Seg db_id=seg from=135 to=144)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD80_53_3
ACD80, SR1, Bacteria

Not on your lists

comp(3155..5275)
DNA (2121bp) protein (707aa)
hypothetical protein
hypothetical protein
Cell divisionFtsK/SpoIIIE (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS46_9BACT (db=UNIREF evalue=2.0e-110 bit_score=404.0 identity=47.32 coverage=61.6690240452617)
seg (db=Seg db_id=seg from=178 to=190)
ACD80_53_4
ACD80, SR1, Bacteria

Not on your lists

5591..6487
DNA (897bp) protein (299aa)
RpoD subfamily RNA polymerase sigma-70 subunit
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma-70 factor n=2 Tax=Flavobacteriaceae RepID=D5BH99_ZUNPS (db=UNIREF evalue=2.0e-90 bit_score=335.0 identity=60.54 coverage=95.6521739130435)
coiled-coil (db=Coil db_id=coil from=259 to=280 evalue=NA)
ACD80_53_5
ACD80, SR1, Bacteria

Not on your lists


6618..9548
DNA (2931bp) protein (977aa)
hypothetical protein
hypothetical protein
Leucyl-tRNA synthetase n=1 Tax=Anoxybacillus flavithermus WK1 RepID=SYL_ANOFW (db=UNIREF evalue=1.0e-109 bit_score=401.0 identity=51.71 coverage=36.2333674513818)
seg (db=Seg db_id=seg from=438 to=449)
ACD80_53_6
ACD80, SR1, Bacteria

Not on your lists

9551..9982
DNA (432bp) protein (144aa)
Integral membrane protein DUF6
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg (db=Seg db_id=seg from=127 to=138)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
ACD80_53_7
ACD80, SR1, Bacteria

Not on your lists

9985..10752
DNA (768bp) protein (256aa)
short-chain dehydrogenase
seg (db=Seg db_id=seg from=2 to=13)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=4 to=222 evalue=2.1e-41)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=7 to=249 evalue=2.3e-41 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
ACD80_53_8
ACD80, SR1, Bacteria

Not on your lists

10810..12633
DNA (1824bp) protein (608aa)
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNN6_FIBSS (db=UNIREF evalue=2.0e-137 bit_score=493.0 identity=42.1 coverage=99.6710526315789)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glmS: glutamine-fructose-6-phosphate transam (db=HMMTigr db_id=TIGR01135 from=2 to=607 evalue=8.6e-221 interpro_id=IPR005855 interpro_description=Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO=Molecular Function: glutamine-fructose-6-phosphate transaminase (isomerizing) activity (GO:0004360), Cellular Component: cytoplasm (GO:0005737), Biological Process: carbohydrate biosynthetic process (GO:0016051))
ACD80_53_9
unknown

Not on your lists

12661..13248
DNA (588bp) protein (196aa)
hypothetical protein
Alpha-ribazole phosphatase n=1 Tax=Lactobacillus coleohominis 101-4-CHN RepID=C7XUN3_9LACO (db=UNIREF evalue=3.0e-10 bit_score=68.6 identity=31.21 coverage=76.530612244898)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=1 to=186 evalue=4.9e-28)
no description (db=Gene3D db_id=G3DSA:3.40.50.1240 from=4 to=186 evalue=2.6e-22)
probably EC:5.4.2.1 Jill Banfield (11/16/12)
ACD80_53_10
ACD80, SR1, Bacteria

Not on your lists

13456..13920
DNA (465bp) protein (155aa)
hypothetical protein
Phosphotyrosine protein phosphatases I (db=superfamily db_id=SSF52788 from=1 to=152 evalue=1.7e-17 interpro_id=IPR017867 interpro_description=Protein-tyrosine phosphatase, low molecular weight GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: protein amino acid dephosphorylation (GO:0006470))
LMWPc (db=HMMPfam db_id=PF01451 from=1 to=98 evalue=5.2e-15 interpro_id=IPR017867 interpro_description=Protein-tyrosine phosphatase, low molecular weight GO=Molecular Function: protein tyrosine phosphatase activity (GO:0004725), Biological Process: protein amino acid dephosphorylation (GO:0006470))
no description (db=Gene3D db_id=G3DSA:3.40.50.270 from=1 to=154 evalue=1.5e-13)
ACD80_53_11
ACD80, SR1, Bacteria

Not on your lists

comp(13982..14413)
DNA (432bp) protein (144aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=32 to=43)
Cupredoxins (db=superfamily db_id=SSF49503 from=50 to=141 evalue=1.8e-15 interpro_id=IPR008972 interpro_description=Cupredoxin)
ACD80_53_12
ACD80, SR1, Bacteria

Not on your lists

14654..17818
DNA (3165bp) protein (1055aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FLT4_FLAJ1 (db=UNIREF evalue=3.0e-108 bit_score=397.0 identity=40.06 coverage=63.5071090047393)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Displaying 12 items

View Taxonomy