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S2_012_000_R2_scaffold_0_prodigal-single

Search features with annotation key words

Displaying items 241-270 of 1386 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2_012_000_R2_scaffold_0_prodigal-single_240
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(229199..229924)
DNA (726bp) protein (242aa)
WGS project CALM00000000 data, contig 821 n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D0N7_STEMA
Putative Outer membrane lipoprotein SlyB {ECO:0000313|EMBL:CEH59432.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
outer membrane lipoprotein
S2_012_000_R2_scaffold_0_prodigal-single_241
unknown

Not on your lists

comp(230013..231206)
DNA (1194bp) protein (398aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_242
unknown

Not on your lists

comp(231206..231586)
DNA (381bp) protein (127aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_243
unknown

Not on your lists

comp(231642..232463)
DNA (822bp) protein (274aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_244
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232553..232804)
DNA (252bp) protein (84aa)
Membrane protein n=4 Tax=Xanthomonas campestris RepID=B0RYS9_XANCB
membrane protein
Membrane protein {ECO:0000313|EMBL:CAP53615.1}; TaxID=509169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain B100).;"
S2_012_000_R2_scaffold_0_prodigal-single_245
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(232957..234252)
DNA (1296bp) protein (432aa)
NhaP-type Na+/H+ and K+/H+ antiporter n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC5_CHLTF
NhaP-type Na+/H+ and K+/H+ antiporter
NhaP-type Na+/H+ and K+/H+ antiporter {ECO:0000313|EMBL:AEP11345.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
S2_012_000_R2_scaffold_0_prodigal-single_246
unknown

Not on your lists

234355..236094
DNA (1740bp) protein (580aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_247
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

236194..236685
DNA (492bp) protein (164aa)
NUDIX hydrolase n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000362B8E8
NUDIX domain protein
NUDIX hydrolase {ECO:0000313|EMBL:KHL16293.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
S2_012_000_R2_scaffold_0_prodigal-single_248
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236735..236971)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) RepID=A8AN82_CITK8
putative stress-response protein
Uncharacterized protein {ECO:0000313|EMBL:KGY18133.1}; TaxID=545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (Citrobacter diversus).;"
S2_012_000_R2_scaffold_0_prodigal-single_249
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237204..238280
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2S6U3_HAHCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC33631.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
S2_012_000_R2_scaffold_0_prodigal-single_250
unknown

Not on your lists

comp(238281..239999)
DNA (1719bp) protein (573aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_251
unknown

Not on your lists

240083..240304
DNA (222bp) protein (74aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_252
unknown

Not on your lists

comp(240301..241599)
DNA (1299bp) protein (433aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_253
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241602..241937)
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas syringae pv. lachrymans str. M301315 RepID=F3E645_PSESL
Uncharacterized protein {ECO:0000313|EMBL:EGH81628.1}; TaxID=629260 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. lachrymans str. M301315.;"
S2_012_000_R2_scaffold_0_prodigal-single_254
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241937..242854)
DNA (918bp) protein (306aa)
membrane protein n=1 Tax=Enterovibrio calviensis RepID=UPI0002E701A0
Membrane protein {ECO:0000313|EMBL:KGE64954.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
hypothetical protein
S2_012_000_R2_scaffold_0_prodigal-single_255
unknown

Not on your lists

243064..248040
DNA (4977bp) protein (1659aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_256
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248093..248344)
DNA (252bp) protein (84aa)
Putative transmembrane protein n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7H2F6_XANCT
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ELQ12153.1}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
S2_012_000_R2_scaffold_0_prodigal-single_257
unknown

Not on your lists

248441..248917
DNA (477bp) protein (159aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_258
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

249006..249743
DNA (738bp) protein (246aa)
ABC transporter ATP-binding protein n=1 Tax=Xanthomonas sacchari RepID=UPI000262B34C
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EYR69693.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ABC transporter ATP-binding protein
S2_012_000_R2_scaffold_0_prodigal-single_259
unknown

Not on your lists

249743..250969
DNA (1227bp) protein (409aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_260
Bdellovibrio exovorus, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250886..252145)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bdellovibrio exovorus JSS RepID=M4VRI5_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH95794.1}; TaxID=1184267 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio exovorus JSS.;"
S2_012_000_R2_scaffold_0_prodigal-single_261
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(252262..253671)
DNA (1410bp) protein (470aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I196_MYCRH
S2_012_000_R2_scaffold_0_prodigal-single_262
unknown

Not on your lists

253995..254816
DNA (822bp) protein (274aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_263
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(254807..255754)
DNA (948bp) protein (316aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
Thioredoxin reductase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UWM5_PSEUP
thioredoxin reductase
S2_012_000_R2_scaffold_0_prodigal-single_264
unknown

Not on your lists

255894..257507
DNA (1614bp) protein (538aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_265
unknown

Not on your lists

comp(257510..258634)
DNA (1125bp) protein (375aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_266
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(258718..259926)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8P2V7_RALSL
hypothetical protein
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:KEZ05803.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
S2_012_000_R2_scaffold_0_prodigal-single_267

Not on your lists

comp(259988..260419)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9BVD2_9RALS
Uncharacterized protein {ECO:0000313|EMBL:KKO01814.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S2_012_000_R2_scaffold_0_prodigal-single_268
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260423..261283)
DNA (861bp) protein (287aa)
DNA ligase III-like protein n=2 Tax=Delftia acidovorans RepID=A9C377_DELAS
DNA ligase III-like protein
DNA ligase III-like protein {ECO:0000313|EMBL:ABX37188.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
S2_012_000_R2_scaffold_0_prodigal-single_269
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

261444..263252
DNA (1809bp) protein (603aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA018 RepID=U8S9H7_PSEAI
putative DNA helicase
Displaying items 241-270 of 1386 in total

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