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S2_012_000_R2_scaffold_0_prodigal-single

Search features with annotation key words

Displaying items 271-300 of 1386 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S2_012_000_R2_scaffold_0_prodigal-single_270

Not on your lists

comp(263249..263971)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI0003622B58
Marine sediment metagenome DNA, contig: S01H1_S04875 {ECO:0000313|EMBL:GAF93233.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S2_012_000_R2_scaffold_0_prodigal-single_271
unknown

Not on your lists

264174..265169
DNA (996bp) protein (332aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_272
unknown

Not on your lists

265202..265444
DNA (243bp) protein (81aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_273
Ophiostoma piceae, Ophiostoma, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

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265826..266596
DNA (771bp) protein (257aa)
Ankyrin repeat protein n=1 Tax=Ophiostoma piceae (strain UAMH 11346) RepID=S3CZK7_OPHP1
Ankyrin repeat protein {ECO:0000313|EMBL:EPE06410.1}; TaxID=1262450 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Ophiostoma.;" source="Ophiostoma piceae (strain UAMH 11346) (Sap stain fungus).;"
hypothetical protein
S2_012_000_R2_scaffold_0_prodigal-single_274
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(266672..267631)
DNA (960bp) protein (320aa)
phosphoesterase n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000377F966
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AET95565.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
S2_012_000_R2_scaffold_0_prodigal-single_275
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267993..268520
DNA (528bp) protein (176aa)
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=399599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (strain OS195).;"
DNA topoisomerase n=1 Tax=Shewanella baltica (strain OS195) RepID=A9L6T8_SHEB9
S2_012_000_R2_scaffold_0_prodigal-single_276
unknown

Not on your lists

comp(268806..269156)
DNA (351bp) protein (117aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_trna_87
unknown

Not on your lists

comp(269213..269299)
DNA (87bp)
transferRNA Leu
S2_012_000_R2_scaffold_0_prodigal-single_trna_86
unknown

Not on your lists

comp(269333..269419)
DNA (87bp)
transferRNA Leu
S2_012_000_R2_scaffold_0_prodigal-single_trna_85
unknown

Not on your lists

comp(269577..269663)
DNA (87bp)
transferRNA Leu
S2_012_000_R2_scaffold_0_prodigal-single_trna_84
unknown

Not on your lists

comp(269698..269784)
DNA (87bp)
transferRNA Leu
S2_012_000_R2_scaffold_0_prodigal-single_trna_83
unknown

Not on your lists

comp(269820..269904)
DNA (85bp)
transferRNA Leu
S2_012_000_R2_scaffold_0_prodigal-single_trna_82
unknown

Not on your lists

comp(269925..270009)
DNA (85bp)
transferRNA Leu
S2_012_000_R2_scaffold_0_prodigal-single_trna_81
unknown

Not on your lists

comp(270049..270134)
DNA (86bp)
transferRNA Leu
S2_012_000_R2_scaffold_0_prodigal-single_trna_80
unknown

Not on your lists

comp(270417..270493)
DNA (77bp)
transferRNA Pro
S2_012_000_R2_scaffold_0_prodigal-single_277
unknown

Not on your lists

comp(270499..271263)
DNA (765bp) protein (255aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_trna_79
unknown

Not on your lists

comp(271276..271353)
DNA (78bp)
transferRNA Pro
S2_012_000_R2_scaffold_0_prodigal-single_trna_78
unknown

Not on your lists

comp(271409..271485)
DNA (77bp)
transferRNA Pro
S2_012_000_R2_scaffold_0_prodigal-single_278
unknown

Not on your lists

271540..271866
DNA (327bp) protein (109aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_trna_77
unknown

Not on your lists

comp(271541..271617)
DNA (77bp)
transferRNA Pro
S2_012_000_R2_scaffold_0_prodigal-single_279
unknown

Not on your lists

comp(271915..272460)
DNA (546bp) protein (182aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_280
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272593..273225)
DNA (633bp) protein (211aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein 1 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HIE8_ACHXA
Haloacid dehalogenase {ECO:0000313|EMBL:KGD90511.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
HAD-superfamily hydrolase
S2_012_000_R2_scaffold_0_prodigal-single_281
unknown

Not on your lists

comp(273302..273919)
DNA (618bp) protein (206aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_282
Pseudomonas parafulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(273994..275298)
DNA (1305bp) protein (435aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=157782 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas parafulva.;"
RNA-splicing ligase RtcB n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KL83_PSEPG
RNA ligase
S2_012_000_R2_scaffold_0_prodigal-single_283
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275529..276068)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N6ZWL6_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO98748.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
S2_012_000_R2_scaffold_0_prodigal-single_284
unknown

Not on your lists

comp(276129..277460)
DNA (1332bp) protein (444aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_285
unknown

Not on your lists

comp(277505..279340)
DNA (1836bp) protein (612aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_286
unknown

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comp(279342..280205)
DNA (864bp) protein (288aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_287
unknown

Not on your lists

comp(280214..280912)
DNA (699bp) protein (233aa)

This feature has no annotations

S2_012_000_R2_scaffold_0_prodigal-single_288
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(280991..282883)
DNA (1893bp) protein (631aa)
Prepilin-type N-terminal cleavage/methylation domain protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8KYX0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KDE89375.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
type IV pilus protein
Displaying items 271-300 of 1386 in total

View Taxonomy