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S2_012_000_R2_scaffold_0_prodigal-single_282

Organism: R2_PLASMID_CIR_59_76

RP 0 / 55 BSCG 4 / 51 ASCG 1 / 38
Location: comp(273994..275298)

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=157782 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas parafulva.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 397.0
  • Bit_score: 398
  • Evalue 7.50e-108
RNA-splicing ligase RtcB n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KL83_PSEPG similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 397.0
  • Bit_score: 386
  • Evalue 2.10e-104
RNA ligase similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 397.0
  • Bit_score: 398
  • Evalue 1.50e-108

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Taxonomy

Pseudomonas parafulva → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAGTACGAAGCTTTCCCGCGGCTCCATCCAAGCCGCTTATGACGCCGATGACGTTGAGTTCCAGCCGAAACGACGTGTCAAAACTCCTAAAACTATCTCTGCCGCGCGTTCGGATGCTTTGCCGGTGGTTCGCTACACCGACCAAGGCCAACCGGTAACAATGTGGACCCCCCACCTGGACAGTGCTGCCTGGCGCCAGGTGCAGGATTTTGCGTCTTTGCCTTTCGTTCACCCCAAAGGCTTGGCATTGATGCCCGATGTACACGTCGGCCGAGGGGTCTGCGTGGGCAGCGTATTGCCCACGGTGGGTGCCCTGGTGCCTGCCGCGGCGGGTACCGATTTGGGGTGCGGCATGCTTGCTGTGCGCCTGGATATGAACGCCCGGCAGCTGCCCGACAACCTTCGTGCCCTGCGCAAGCGGCTGGAAGCGCGCATCCCCGCCGGATCGGGCCAGTCGCATCGCGAGGTGCCAGCCTCGGTCGCTGCAGCGTGGGCCGCCCGCCAGGGCGCCTACGGGCAAGTCACCGCCCGCCACCCCCGCCTGGCCTTGAGAGATCCCGCCAAGCACTTAGGAACGCTGGGCGGTGGAAACCATTTCGTGGAAATCAGCCTAGACGAAACCAGCGGCGTGTGGGTCGTCATCCATTCCGGTTCCCGCGGGCCGGGTTCGGCCTTGGGCCAGTGGTTCATCGACCAGGCGTGGTCGCGCGCCAAGGCCGAGGGCCAAGCATTGGCCCACCTGGGCTGGTTCCCCGAATCGGATCCGCTGTTTGCCCCGTATGTGGAGGCTTTGATGTGGTCGCAAGACTTCGCCTTGGTCAACCGCCAGTTGATGCTCGAGGCGGTGATGGAAGCCCTCGAGCTGGAGTTGGGTCGCCGCCCAGCCATCACCGGTGAGGCCATCAATTGCCACCACAACTACGTGGCCCGTGAACAACACTTTGGACAGGATCTGTGGATCACCCGCAAGGGCGCGATTCGGGCCGGCGTGGGCGAGTGGGGCATCATCCCGGGTTCGATGGGCGCGGAAACCTACATCGTGAAAGGCAAGGGGGTGGCCGAGTCGTATTGCTCCTGTGCTCATGGCGCCGGTCGGGCCATGACGCGCACCCAAGCGCGTGCCCAGTTCACGGTGAAGGACTTGAAAAAAGCCGTGGCGGGCGTGGAGTGCCAGGTGAGCAAGGCGCGGGTGGATGAAATCCCTCACGCTTACAAGCCCATCAAGCAAGTCATGGCCCACCAGCAATCCTTGGTGGAGCCGTTGTTTGTGCTCAAGCAAGTGCTGTGCCTGAAGGGCGACTGA
PROTEIN sequence
Length: 435
MSTKLSRGSIQAAYDADDVEFQPKRRVKTPKTISAARSDALPVVRYTDQGQPVTMWTPHLDSAAWRQVQDFASLPFVHPKGLALMPDVHVGRGVCVGSVLPTVGALVPAAAGTDLGCGMLAVRLDMNARQLPDNLRALRKRLEARIPAGSGQSHREVPASVAAAWAARQGAYGQVTARHPRLALRDPAKHLGTLGGGNHFVEISLDETSGVWVVIHSGSRGPGSALGQWFIDQAWSRAKAEGQALAHLGWFPESDPLFAPYVEALMWSQDFALVNRQLMLEAVMEALELELGRRPAITGEAINCHHNYVAREQHFGQDLWITRKGAIRAGVGEWGIIPGSMGAETYIVKGKGVAESYCSCAHGAGRAMTRTQARAQFTVKDLKKAVAGVECQVSKARVDEIPHAYKPIKQVMAHQQSLVEPLFVLKQVLCLKGD*