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js4906-27-3_S30_scaffold_177

Search features with annotation key words

Displaying items 31-60 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_177_31
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(35842..36813)
DNA (972bp) protein (324aa)
SMC domain protein Tax=Fusobacterium sp. CAG:815 RepID=R7LX69_9FUSO
SMC domain protein {ECO:0000313|EMBL:CDE93115.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
js4906-27-3_S30_scaffold_177_32
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

36906..38201
DNA (1296bp) protein (432aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LL95_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE88478.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-27-3_S30_scaffold_177_33
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

38306..38803
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:439 RepID=R7JET9_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE62464.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-27-3_S30_scaffold_177_34
unknown

Not on your lists

38832..39344
DNA (513bp) protein (171aa)

This feature has no annotations

js4906-27-3_S30_scaffold_177_35
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(39350..40540)
DNA (1191bp) protein (397aa)
Periplasmic sugar-binding protein of ABC transporter Tax=Clostridium sp. CAG:729 RepID=R7LNH5_9CLOT
Periplasmic sugar-binding protein of ABC transporter {ECO:0000313|EMBL:CDE89681.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
solute-binding protein
js4906-27-3_S30_scaffold_177_36
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

40666..41508
DNA (843bp) protein (281aa)
Radical SAM domain protein Tax=Clostridium sp. CAG:967 RepID=R5K919_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:CCY63233.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
radical SAM domain-containing protein
js4906-27-3_S30_scaffold_177_37
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(41512..42084)
DNA (573bp) protein (191aa)
coiled-coil 35..70 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCZ51530.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-27-3_S30_scaffold_177_38
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(42094..44028)
DNA (1935bp) protein (645aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LKG8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89145.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-27-3_S30_scaffold_177_39
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

44206..44598
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Acinetobacter sp. CAG:196 RepID=R5SKH6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CCZ51394.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
js4906-27-3_S30_scaffold_177_40
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists


comp(44672..44941)
DNA (270bp) protein (90aa)
30S ribosomal protein S20 Tax=Fusobacterium sp. CAG:815 RepID=R7LUQ3_9FUSO
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
30S ribosomal protein S20
js4906-27-3_S30_scaffold_177_41
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

45168..46076
DNA (909bp) protein (303aa)
Uncharacterized protein Tax=Clostridium sp. CAG:967 RepID=R5KQL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY63411.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-27-3_S30_scaffold_177_42
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(46126..46572)
DNA (447bp) protein (149aa)
SpeD; S-adenosylmethionine decarboxylase proenzyme; K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50] bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
Spermidine synthase (EC:2.5.1.16 4.1.1.50)
js4906-27-3_S30_scaffold_177_43
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(46767..47654)
DNA (888bp) protein (296aa)
RNA polymerase sigma factor Tax=Brachyspira sp. CAG:484 RepID=R5HH74_9SPIR
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
RpoD family RNA polymerase sigma factor
js4906-27-3_S30_scaffold_177_44
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(47932..48984)
DNA (1053bp) protein (351aa)
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] Tax=Clostridium sp. CAG:768 RepID=R7HT98_9CLOT
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000313|EMBL:CDE42476.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
glucosamine--fructose-6-phosphate aminotransferase,isomerizing
js4906-27-3_S30_scaffold_177_45
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(48988..50433)
DNA (1446bp) protein (482aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Fusobacterium sp. CAG:439 RepID=R7J589_9FUSO
glutamyl-tRNA(Gln) amidotransferase subunit B
js4906-27-3_S30_scaffold_177_46
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

50504..51325
DNA (822bp) protein (274aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Fusobacterium sp. CAG:815 RepID=R7LWD7_9FUSO
2-dehydro-3-deoxyphosphooctonate aldolase
js4906-27-3_S30_scaffold_177_47
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

51316..51924
DNA (609bp) protein (203aa)
Metallo-beta-lactamase family protein Tax=Fusobacterium sp. CAG:439 RepID=R7J511_9FUSO
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CDE59019.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
beta-lactamase domain-containing protein
js4906-27-3_S30_scaffold_177_48
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists


51921..52955
DNA (1035bp) protein (345aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
Phenylalanine--tRNA ligase alpha subunit Tax=Clostridium sp. CAG:729 RepID=R7LHB8_9CLOT
phenylalanyl-tRNA synthetase subunit alpha
js4906-27-3_S30_scaffold_177_49
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(53067..53579)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DRV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX79432.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_177_50
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(53742..54392)
DNA (651bp) protein (217aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Fusobacterium sp. CAG:815 RepID=R7LY26_9FUSO
js4906-27-3_S30_scaffold_177_51
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(54408..56108)
DNA (1701bp) protein (567aa)
AMP-dependent synthetase and ligase Tax=Brachyspira sp. CAG:484 RepID=R5HJI3_9SPIR
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CCY24967.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
AMP-dependent synthetase and ligase
js4906-27-3_S30_scaffold_177_52
unknown

Not on your lists

comp(56212..57183)
DNA (972bp) protein (324aa)

This feature has no annotations

js4906-27-3_S30_scaffold_177_53
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

comp(57337..58176)
DNA (840bp) protein (280aa)
Response regulator receiver modulated metal dependent phosphohydrolase bin=GWF1_Spirochaetes_51_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
PAS/PAC sensor protein
Tax=GWF1_Spirochaetes_51_8_curated
js4906-27-3_S30_scaffold_177_54
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58197..58466)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Clostridium sp. CAG:306 RepID=R6PM07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC21899.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
hypothetical protein
js4906-27-3_S30_scaffold_177_55
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(58480..58860)
DNA (381bp) protein (127aa)
coiled-coil 59..80 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Uncharacterized protein {ECO:0000313|EMBL:CCX80627.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_177_56
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

comp(58870..59190)
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:815 RepID=R7LVG8_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE92071.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
hypothetical protein
js4906-27-3_S30_scaffold_177_57
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(59328..59615)
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H2E5_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23865.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_177_58
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(59721..59951)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Clostridium sp. CAG:715 RepID=R5DL39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX80980.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_177_59
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(60059..61036)
DNA (978bp) protein (326aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein Tax=Brachyspira sp. CAG:484 RepID=R5HJJ9_9SPIR
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:CCY24891.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
putative lactate dehydrogenase
js4906-27-3_S30_scaffold_177_60
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

61133..61636
DNA (504bp) protein (168aa)
Heat shock protein Hsp20 Tax=Brachyspira sp. CAG:484 RepID=R5HJ90_9SPIR
Heat shock protein Hsp20 {ECO:0000313|EMBL:CCY24892.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
heat shock protein Hsp20
Displaying items 31-60 of 91 in total

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