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js4906-27-3_S30_scaffold_177

Search features with annotation key words

Displaying items 61-90 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_177_61
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

61807..64974
DNA (3168bp) protein (1056aa)
SNF2/helicase domain protein Tax=Fusobacterium sp. CAG:439 RepID=R7J882_9FUSO
SNF2/helicase domain protein {ECO:0000313|EMBL:CDE60144.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
SNF2-related protein
js4906-27-3_S30_scaffold_177_62
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

65019..65642
DNA (624bp) protein (208aa)
transmembrane_regions 123..145 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Putative phosphoesterase {ECO:0000313|EMBL:CCZ51571.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
hypothetical protein
js4906-27-3_S30_scaffold_177_63
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

65691..66521
DNA (831bp) protein (277aa)
Peptidase M48 Ste24p Tax=Clostridium sp. CAG:715 RepID=R5DST6_9CLOT
Peptidase M48 Ste24p {ECO:0000313|EMBL:CCX79767.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
js4906-27-3_S30_scaffold_177_64
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(66590..67531)
DNA (942bp) protein (314aa)
prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin peptidase Tax=Clostridium sp. CAG:768 RepID=R7HXI0_9CLOT
Type 4 prepilin peptidase {ECO:0000313|EMBL:CDE43663.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-27-3_S30_scaffold_177_65
GWF2_Melainabacteria_32_7_curated, Melainabacteria, Bacteria

Not on your lists

comp(67528..68337)
DNA (810bp) protein (270aa)
sigJ; RNA polymerase sigma factor SigF; K03090 RNA polymerase sigma-B factor bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
sigma-B/F/G subfamily RNA polymerase sigma-28 factor
Tax=GWF2_Melainabacteria_32_7_curated
js4906-27-3_S30_scaffold_177_66
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(68390..71110)
DNA (2721bp) protein (907aa)
processing peptidase (EC:3.4.24.64)
Zinc protease Tax=Clostridium sp. CAG:729 RepID=R7LPD8_9CLOT
Zinc protease {ECO:0000313|EMBL:CDE89588.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-27-3_S30_scaffold_177_67
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

71182..72993
DNA (1812bp) protein (604aa)
seg 148..164 bin=MEL_C1 species=MEL_C1 genus=MEL_C1 taxon_order=MEL_C1 taxon_class=MEL_C1 phylum=Melainabacteria tax=MEL_C1 organism_group=Melainabacteria
TPR Domain containing protein {ECO:0000313|EMBL:CCY61985.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
hypothetical protein
js4906-27-3_S30_scaffold_177_68
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

comp(72990..73856)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LNN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89726.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-27-3_S30_scaffold_177_69
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(73853..74740)
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H2R3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY23975.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_177_70
unknown

Not on your lists

74835..75236
DNA (402bp) protein (134aa)

This feature has no annotations

js4906-27-3_S30_scaffold_177_71
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(75362..75685)
DNA (324bp) protein (108aa)
Thioredoxin Tax=Clostridium sp. CAG:768 RepID=R7I0E0_9CLOT
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
trx; thioredoxin
js4906-27-3_S30_scaffold_177_72
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

75786..76703
DNA (918bp) protein (306aa)
DNA polymerase III polC-type Tax=Brachyspira sp. CAG:484 RepID=R5HK14_9SPIR
DNA polymerase III polC-type {ECO:0000313|EMBL:CCY25021.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
dnaF; DNA polymerase III PolC-type
js4906-27-3_S30_scaffold_177_73
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

76706..78091
DNA (1386bp) protein (462aa)
Regulatory protein UhpC-like protein Tax=Clostridium sp. CAG:967 RepID=R5KQT2_9CLOT
Regulatory protein UhpC-like protein {ECO:0000313|EMBL:CCY63312.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
glucose 6-phosphate permease
js4906-27-3_S30_scaffold_177_74
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(78141..78767)
DNA (627bp) protein (209aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Endonuclease III Tax=Fusobacterium sp. CAG:439 RepID=R7J4X8_9FUSO
js4906-27-3_S30_scaffold_177_75
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(78760..79776)
DNA (1017bp) protein (339aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase Tax=Acinetobacter sp. CAG:196 RepID=R5SZC2_9GAMM
js4906-27-3_S30_scaffold_177_76
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists

comp(79776..81137)
DNA (1362bp) protein (454aa)
Glr4115 protein Tax=Clostridium sp. CAG:715 RepID=R5DM48_9CLOT
Glr4115 protein {ECO:0000313|EMBL:CCX79859.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
hypothetical protein
js4906-27-3_S30_scaffold_177_77
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

comp(81179..81901)
DNA (723bp) protein (241aa)
ABC transporter related protein Tax=Clostridium sp. CAG:768 RepID=R7I069_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDE43917.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
ABC transporter ATP-binding protein
js4906-27-3_S30_scaffold_177_78
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

comp(81918..82727)
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Fusobacterium sp. CAG:439 RepID=R7J669_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CDE59330.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
protein of unknown function DUF140
js4906-27-3_S30_scaffold_177_79
R_OD1_Magasanikbacteria_44_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

82810..84333
DNA (1524bp) protein (508aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI000374C92C
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_44_11_curated
js4906-27-3_S30_scaffold_177_80
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

84611..84826
DNA (216bp) protein (72aa)
Translation initiation factor IF-1 Tax=Clostridium sp. CAG:768 RepID=R7HXV4_9CLOT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
translation initiation factor IF-1
js4906-27-3_S30_scaffold_177_81
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

84846..84959
DNA (114bp) protein (38aa)
50S ribosomal protein L36 Tax=Clostridium sp. CAG:813 RepID=R7MIZ7_9CLOT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
rpmJ; 50S ribosomal protein L36
js4906-27-3_S30_scaffold_177_82
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists


85017..85388
DNA (372bp) protein (124aa)
30S ribosomal protein S13 Tax=Faecalibacterium prausnitzii RepID=C7H924_9FIRM bin=MEL_C1 species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=MEL_C1 organism_group=Melainabacteria
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
rpsM; 30S ribosomal protein S13
js4906-27-3_S30_scaffold_177_83
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists


85446..85832
DNA (387bp) protein (129aa)
30S ribosomal protein S11 Tax=Acinetobacter sp. CAG:196 RepID=R5S859_9GAMM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
SSU ribosomal protein S11P
js4906-27-3_S30_scaffold_177_84
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists


85866..86468
DNA (603bp) protein (201aa)
30S ribosomal protein S4 Tax=Clostridium sp. CAG:967 RepID=R5K9W0_9CLOT
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
rpsD; 30S ribosomal protein S4
js4906-27-3_S30_scaffold_177_85
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

86512..87480
DNA (969bp) protein (323aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha Tax=Clostridium sp. CAG:967 RepID=R5KEK3_9CLOT
js4906-27-3_S30_scaffold_177_86
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists


87498..87926
DNA (429bp) protein (143aa)
50S ribosomal protein L17 Tax=Clostridium sp. CAG:967 RepID=R5K9W5_9CLOT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
rplQ; 50S ribosomal protein L17
js4906-27-3_S30_scaffold_177_87
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

87952..88683
DNA (732bp) protein (244aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
tRNA pseudouridine synthase A Tax=Clostridium sp. CAG:768 RepID=R7HZ38_9CLOT
tRNA pseudouridine synthase A
js4906-27-3_S30_scaffold_177_88
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists


88699..89139
DNA (441bp) protein (147aa)
50S ribosomal protein L13 Tax=Clostridium sp. CAG:768 RepID=R7HXX1_9CLOT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
50S ribosomal protein L13
js4906-27-3_S30_scaffold_177_89
Clostridium sp. CAG:715, Melainabacteria, Bacteria

Not on your lists


89139..89531
DNA (393bp) protein (131aa)
30S ribosomal protein S9 Tax=Clostridium sp. CAG:715 RepID=R5DG79_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:715.;"
30S ribosomal protein S9
js4906-27-3_S30_scaffold_177_90
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

89869..90732
DNA (864bp) protein (288aa)
Metal dependent phosphohydrolase Tax=Clostridium sp. CAG:967 RepID=R5K5W5_9CLOT
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CCY62063.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
two-component response regulator
Displaying items 61-90 of 91 in total

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