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js4906-27-3_S30_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
js4906-27-3_S30_scaffold_177_1
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(120..770)
DNA (651bp) protein (217aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Tax=Brachyspira sp. CAG:484 RepID=R5H3F2_9SPIR
js4906-27-3_S30_scaffold_177_2
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(771..1697)
DNA (927bp) protein (309aa)
thiL; thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase Tax=Clostridium sp. CAG:967 RepID=R5KDY1_9CLOT
Thiamine-monophosphate kinase {ECO:0000313|EMBL:CCY63319.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
js4906-27-3_S30_scaffold_177_3
unknown

Not on your lists

1778..1885
DNA (108bp) protein (36aa)

This feature has no annotations

js4906-27-3_S30_scaffold_177_4
Clostridium sp. CAG:768, Melainabacteria, Bacteria

Not on your lists

1912..3060
DNA (1149bp) protein (383aa)
folP; dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000313|EMBL:CDE42479.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:768.;"
js4906-27-3_S30_scaffold_177_5
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(3031..4566)
DNA (1536bp) protein (512aa)
Alpha-amylase putative Tax=Clostridium sp. CAG:967 RepID=R5KQB6_9CLOT
Alpha-amylase putative {ECO:0000313|EMBL:CCY63316.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
glycosidase
js4906-27-3_S30_scaffold_177_6
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

4719..6203
DNA (1485bp) protein (495aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LMV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89028.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
js4906-27-3_S30_scaffold_177_7
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(6335..7423)
DNA (1089bp) protein (363aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase Tax=Brachyspira sp. CAG:484 RepID=R5H598_9SPIR
js4906-27-3_S30_scaffold_177_8
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

7564..8292
DNA (729bp) protein (243aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Two-component sensor histidine kinase Tax=Brachyspira sp. CAG:484 RepID=R5HFG6_9SPIR
two-component sensor histidine kinase
js4906-27-3_S30_scaffold_177_9
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

8295..9563
DNA (1269bp) protein (423aa)
Two-component response regulator Tax=Clostridium sp. CAG:813 RepID=R7MGR5_9CLOT
Two-component response regulator {ECO:0000313|EMBL:CDE99810.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
response regulator receiver modulated diguanylate cyclase
js4906-27-3_S30_scaffold_177_10
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(9602..10942)
DNA (1341bp) protein (447aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Glutamine synthetase Tax=Brachyspira sp. CAG:484 RepID=R5HK17_9SPIR
glutamine synthetase, type I
js4906-27-3_S30_scaffold_177_11
Clostridium sp. CAG:729, Melainabacteria, Bacteria

Not on your lists

11397..12440
DNA (1044bp) protein (348aa)
Uncharacterized protein Tax=Clostridium sp. CAG:729 RepID=R7LPR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE89327.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:729.;"
phage tail tape measure protein, TP901 family
js4906-27-3_S30_scaffold_177_12
unknown

Not on your lists

12537..13199
DNA (663bp) protein (221aa)

This feature has no annotations

js4906-27-3_S30_scaffold_177_13
RIFOXYA2_FULL_Melainabacteria_32_9_curated, Melainabacteria, Bacteria

Not on your lists

comp(13196..13774)
DNA (579bp) protein (193aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
probable Dephospho-CoA kinase
Tax=RIFOXYA2_FULL_Melainabacteria_32_9_curated
js4906-27-3_S30_scaffold_177_14
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(13771..14499)
DNA (729bp) protein (243aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
ribosomal large subunit pseudouridine synthase B (EC:6.1.1.1)
Pseudouridine synthase Tax=Brachyspira sp. CAG:484 RepID=R5HKK8_9SPIR
js4906-27-3_S30_scaffold_177_15
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14486..14896)
DNA (411bp) protein (137aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
Thioesterase superfamily protein {ECO:0000313|EMBL:CCY25227.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
YbgC/YbaW family acyl-CoA thioester hydrolase
js4906-27-3_S30_scaffold_177_16
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(14969..16660)
DNA (1692bp) protein (564aa)
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-glucan phosphorylase Tax=Brachyspira sp. CAG:484 RepID=R5HKY7_9SPIR
Alpha-glucan phosphorylase {ECO:0000313|EMBL:CCY25336.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_177_17
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(16815..19892)
DNA (3078bp) protein (1026aa)
Superfamily I DNA/RNA helicase Tax=Brachyspira sp. CAG:484 RepID=R5HFQ4_9SPIR
Superfamily I DNA/RNA helicase {ECO:0000313|EMBL:CCY23667.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
superfamily I DNA/RNA helicase
js4906-27-3_S30_scaffold_177_18
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

19946..21085
DNA (1140bp) protein (380aa)
Polynucleotide adenylyltransferase region Tax=Clostridium sp. CAG:813 RepID=R7M924_9CLOT
Polynucleotide adenylyltransferase region {ECO:0000313|EMBL:CDE97589.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
polynucleotide adenylyltransferase region
js4906-27-3_S30_scaffold_177_19
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(21071..22912)
DNA (1842bp) protein (614aa)
Uncharacterized protein Tax=Brachyspira sp. CAG:484 RepID=R5H985_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY24659.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
js4906-27-3_S30_scaffold_177_20
Acinetobacter sp. CAG:196, Melainabacteria, Bacteria

Not on your lists

comp(23036..24127)
DNA (1092bp) protein (364aa)
hypothetical protein; K02836 peptide chain release factor 2 bin=MEL_C2 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=MEL_C2 organism_group=Melainabacteria
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; environmental samples.;" source="Acinetobacter sp. CAG:196.;"
peptide chain release factor 1 (bRF-1)
js4906-27-3_S30_scaffold_177_21
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24227..25276
DNA (1050bp) protein (350aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
GDP-L-fucose synthase Tax=Azospirillum sp. CAG:260 RepID=R6I266_9PROT
NAD-dependent epimerase/dehydratase
js4906-27-3_S30_scaffold_177_22
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists


25355..25555
DNA (201bp) protein (67aa)
50S ribosomal protein L31 Tax=Brachyspira sp. CAG:484 RepID=R5HIF4_9SPIR
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
rpmE2; 50S ribosomal protein L31
js4906-27-3_S30_scaffold_177_23
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

comp(25674..27197)
DNA (1524bp) protein (508aa)
Amino acid carrier protein Tax=Brachyspira sp. CAG:484 RepID=R5H5X6_9SPIR
Amino acid carrier protein {ECO:0000313|EMBL:CCY24908.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
amino acid carrier protein
js4906-27-3_S30_scaffold_177_24
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

27297..29288
DNA (1992bp) protein (664aa)
mngB; alpha-mannosidase (EC:3.2.1.-)
Sugar hydrolase Tax=Clostridium sp. CAG:813 RepID=R7MG91_9CLOT
Sugar hydrolase {ECO:0000313|EMBL:CDF00119.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-27-3_S30_scaffold_177_25
Fusobacterium sp. CAG:439, Melainabacteria, Bacteria

Not on your lists

29333..29590
DNA (258bp) protein (86aa)
General secretion pathway protein G Tax=Fusobacterium sp. CAG:439 RepID=R7JCF8_9FUSO
General secretion pathway protein G {ECO:0000313|EMBL:CDE61426.1}; species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:439.;"
js4906-27-3_S30_scaffold_177_26
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(29649..31322)
DNA (1674bp) protein (558aa)
adenine deaminase Tax=Pontibacter roseus RepID=UPI0003821A4B
adenine deaminase
Tax=RBG_13_Nitrospirae_41_22_curated
js4906-27-3_S30_scaffold_177_27
Clostridium sp. CAG:967, Melainabacteria, Bacteria

Not on your lists

comp(31345..32589)
DNA (1245bp) protein (415aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:967.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase Tax=Clostridium sp. CAG:967 RepID=R5KQ22_9CLOT
js4906-27-3_S30_scaffold_177_28
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32598..34079)
DNA (1482bp) protein (494aa)
TPR repeat-containing protein Tax=Clostridium sp. CAG:306 RepID=R6P8M6_9CLOT
TPR repeat-containing protein {ECO:0000313|EMBL:CDC19860.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
TPR domain-containing protein
js4906-27-3_S30_scaffold_177_29
Clostridium sp. CAG:813, Melainabacteria, Bacteria

Not on your lists

comp(34061..34546)
DNA (486bp) protein (162aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) (EC:3.1.3.45)
3-deoxy-manno-octulosonate-8-phosphatase Tax=Clostridium sp. CAG:813 RepID=R7ME00_9CLOT
3-deoxy-manno-octulosonate-8-phosphatase {ECO:0000313|EMBL:CDE99299.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:813.;"
js4906-27-3_S30_scaffold_177_30
Brachyspira sp. CAG:484, Melainabacteria, Bacteria

Not on your lists

34594..35859
DNA (1266bp) protein (422aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:484.;"
Two-component sensor histidine kinase Tax=Brachyspira sp. CAG:484 RepID=R5HHG2_9SPIR
two-component sensor histidine kinase
Displaying items 1-30 of 91 in total

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