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LSDeep1_scaffold_41_prodigal-single

Search features with annotation key words

Displaying items 1-30 of 533 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LSDeep1_scaffold_41_prodigal-single_1
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..453
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FS70_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM71036.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. AzwK-3b.;"
LSDeep1_scaffold_41_prodigal-single_2
unknown

Not on your lists

450..680
DNA (231bp) protein (77aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_3
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

740..1489
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3XEP0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ43711.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. MED193.;"
CHP02594 family protein
LSDeep1_scaffold_41_prodigal-single_4
unknown

Not on your lists

1489..1710
DNA (222bp) protein (74aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_5
unknown

Not on your lists

1652..1846
DNA (195bp) protein (65aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_6

Not on your lists

1878..2984
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Sulfitobacter phage pCB2047-A RepID=M4QPK4_9VIRU
Putative oxidoreductase {ECO:0000313|EMBL:AIE48239.1}; TaxID=754043 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Sulfitobacter phage pCB2047-C.;"
hypothetical protein
LSDeep1_scaffold_41_prodigal-single_7
unknown

Not on your lists

comp(3028..3162)
DNA (135bp) protein (45aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3134..3949)
DNA (816bp) protein (272aa)
Periplasmic serine protease, Do/DeqQ family {ECO:0000313|EMBL:CDM66410.1}; EC=3.4.21.- {ECO:0000313|EMBL:CDM66410.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI0002F5933F
protease Do
LSDeep1_scaffold_41_prodigal-single_trna_9
unknown

Not on your lists

comp(4178..4252)
DNA (75bp)
transferRNA Asn
LSDeep1_scaffold_41_prodigal-single_9
unknown

Not on your lists

comp(4457..4666)
DNA (210bp) protein (70aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_10
unknown

Not on your lists

comp(4669..4968)
DNA (300bp) protein (100aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_11
unknown

Not on your lists

comp(5069..5395)
DNA (327bp) protein (109aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_12
unknown

Not on your lists

comp(5392..5526)
DNA (135bp) protein (45aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_13
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5523..5849)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC22481.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
LSDeep1_scaffold_41_prodigal-single_14
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5846..6268)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0PE49_RHIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGM44459.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
LSDeep1_scaffold_41_prodigal-single_15
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6268..6480)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EUX7_DICNV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ13598.1}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelobacter nodosus (strain VCS1703A).;"
LSDeep1_scaffold_41_prodigal-single_16
unknown

Not on your lists

comp(6490..6747)
DNA (258bp) protein (86aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_17
unknown

Not on your lists

comp(6911..7186)
DNA (276bp) protein (92aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_18
Sulfitobacter sp. CB2047, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7186..7596)
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NUP5_AZOS1
Single-stranded DNA-binding protein {ECO:0000256|RuleBase:RU000524}; TaxID=1525218 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter sp. CB2047.;"
ssb; single-strand DNA-binding protein
LSDeep1_scaffold_41_prodigal-single_19
Oceaniovalibus guishaninsula, Oceaniovalibus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7598..7843)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HS59_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EKE45534.1}; TaxID=1231392 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceaniovalibus.;" source="Oceaniovalibus guishaninsula JLT2003.;"
hypothetical protein
LSDeep1_scaffold_41_prodigal-single_20
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7845..8510)
DNA (666bp) protein (222aa)
DNA polymerase n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GFZ5_RUEST
hypothetical protein
DNA polymerase {ECO:0000313|EMBL:ABF64421.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain TM1040) (Silicibacter sp.).;"
LSDeep1_scaffold_41_prodigal-single_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8521..9162)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000370C81E
ERF superfamily {ECO:0000313|EMBL:EYR81434.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ERF family protein
LSDeep1_scaffold_41_prodigal-single_22
unknown

Not on your lists

comp(9159..9554)
DNA (396bp) protein (132aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_23
unknown

Not on your lists

comp(9634..9849)
DNA (216bp) protein (72aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_24

Not on your lists

10225..10905
DNA (681bp) protein (227aa)
p097 n=1 Tax=Rhizobium phage 16-3 RepID=B4UTY5_BP163
Uncharacterized protein {ECO:0000313|EMBL:KKK89823.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
16-3p; p097
LSDeep1_scaffold_41_prodigal-single_25

Not on your lists

10905..11195
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Sulfitobacter phage pCB2047-C RepID=M4NUV2_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGG91224.1}; TaxID=754043 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Sulfitobacter phage pCB2047-C.;"
LSDeep1_scaffold_41_prodigal-single_26
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11224..12093
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa 6c RepID=V8K3E3_XYLFS
Putative uncharacterized protein {ECO:0000313|EMBL:EHK77711.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
LSDeep1_scaffold_41_prodigal-single_27
Phaeobacter gallaeciensis, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12095..12433
DNA (339bp) protein (113aa)
UPI0003D6CEAF related cluster n=1 Tax=unknown RepID=UPI0003D6CEAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHD10020.1}; TaxID=1423144 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter gallaeciensis DSM 26640.;"
LSDeep1_scaffold_41_prodigal-single_28
unknown

Not on your lists

12435..12671
DNA (237bp) protein (79aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_29
unknown

Not on your lists

12668..13042
DNA (375bp) protein (125aa)

This feature has no annotations

Displaying items 1-30 of 533 in total

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