ggKbase home page

LSDeep1_scaffold_41_prodigal-single

Search features with annotation key words

Displaying items 511-533 of 533 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LSDeep1_scaffold_41_prodigal-single_502
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

410819..411667
DNA (849bp) protein (283aa)
hypothetical protein GobsU_17381 id=4045301 bin=GWF2_Planctomycetes_50_10 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
condensin subunit ScpB
Tax=RBG_16_Planctomycetes_59_8_curated
LSDeep1_scaffold_41_prodigal-single_503
unknown

Not on your lists

411855..413756
DNA (1902bp) protein (634aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_504
unknown

Not on your lists

413978..414310
DNA (333bp) protein (111aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_505
unknown

Not on your lists

414304..414471
DNA (168bp) protein (56aa)
Putative transposase for insertion sequence element n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT05_9SPHN
putative transposase for insertion sequence element
LSDeep1_scaffold_41_prodigal-single_506

Not on your lists

414901..415179
DNA (279bp) protein (93aa)
Mobile element protein n=1 Tax=uncultured bacterium A1Q1_fos_1053 RepID=L7VZK2_9BACT
Mobile element protein {ECO:0000313|EMBL:AGC71600.1}; TaxID=1256539 species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_1053.;"
Transposase
LSDeep1_scaffold_41_prodigal-single_507
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

415176..415766
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IBS9_BORPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP41479.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
LSDeep1_scaffold_41_prodigal-single_508
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

415929..417227
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000360F4FD
NADH dehydrogenase {ECO:0000313|EMBL:KGE88039.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
ferredoxin--NAD(+) reductase
LSDeep1_scaffold_41_prodigal-single_509
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

417230..418645
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036E3F47
Putative electron transport protein YccM {ECO:0000313|EMBL:KHJ39492.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
4Fe-4S ferredoxin
LSDeep1_scaffold_41_prodigal-single_510
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(418781..425710)
DNA (6930bp) protein (2310aa)
Uncharacterized protein {ECO:0000313|EMBL:KDP95260.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
LSDeep1_scaffold_41_prodigal-single_511
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(425716..428295)
DNA (2580bp) protein (860aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037BDC77
Uncharacterized protein {ECO:0000313|EMBL:KDP95261.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
von Willebrand factor, type A
LSDeep1_scaffold_41_prodigal-single_512

Not on your lists

comp(428292..430043)
DNA (1752bp) protein (584aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S28189 {ECO:0000313|EMBL:GAG34530.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LSDeep1_scaffold_41_prodigal-single_513
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(430040..430990)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037EAE78
Uncharacterized protein {ECO:0000313|EMBL:KDP95263.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
von Willebrand factor type A
LSDeep1_scaffold_41_prodigal-single_514
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(431000..432019)
DNA (1020bp) protein (340aa)
ATPase AAA n=1 Tax=alpha proteobacterium L41A RepID=UPI000377E6D7
ATPase, AAA family, putative {ECO:0000313|EMBL:EDX81698.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
ATPase AAA
LSDeep1_scaffold_41_prodigal-single_515
Pseudogymnoascus pannorum, Pseudogymnoascus, Leotiomycetes, Ascomycota, Fungi

Not on your lists

comp(432089..433618)
DNA (1530bp) protein (510aa)
Uncharacterized protein {ECO:0000313|EMBL:KFY74957.1}; TaxID=1420912 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.;" source="Pseudogymnoascus pannorum VKM F-103.;"
LSDeep1_scaffold_41_prodigal-single_516
unknown

Not on your lists

comp(433637..436144)
DNA (2508bp) protein (836aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_517
unknown

Not on your lists

comp(436343..437419)
DNA (1077bp) protein (359aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_518
unknown

Not on your lists

437610..438230
DNA (621bp) protein (207aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_519
unknown

Not on your lists

438313..440550
DNA (2238bp) protein (746aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_520
Triticum urartu, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

440766..440990
DNA (225bp) protein (75aa)
2-dehydro-3-deoxyphosphogluconate aldolase (EC:4.1.3.16)
KHG/KDPG aldolase n=1 Tax=Triticum urartu RepID=M7YNT1_TRIUA
KHG/KDPG aldolase {ECO:0000313|EMBL:EMS48606.1}; Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_22490-P1}; TaxID=4572 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum.;" source="Triticum urartu (Red wild einkorn) (Crithodium urartu).;"
LSDeep1_scaffold_41_prodigal-single_521
unknown

Not on your lists

comp(441271..441726)
DNA (456bp) protein (152aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_522
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(441737..442519)
DNA (783bp) protein (261aa)
Methyltransferase n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H2D2_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAK24855.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
LSDeep1_scaffold_41_prodigal-single_523
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(442527..443492)
DNA (966bp) protein (322aa)
type 12 methyltransferase id=14625394 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
type 11 methyltransferase
Tax=CSP1_6_Rokubacteria
LSDeep1_scaffold_41_prodigal-single_524

Not on your lists

comp(443489..443983)
DNA (495bp) protein (165aa)
Protoporphyrinogen oxidase n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RNG2_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKR49040.1}; TaxID=1619047 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_40_17.;"
protoporphyrinogen oxidase
Displaying items 511-533 of 533 in total

View Taxonomy