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LSDeep1_scaffold_41_prodigal-single

Search features with annotation key words

Displaying items 391-420 of 533 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
LSDeep1_scaffold_41_prodigal-single_386
unknown

Not on your lists

324084..324284
DNA (201bp) protein (67aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_387
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

324286..324936
DNA (651bp) protein (217aa)
Prohead core scaffold and protease n=1 Tax=Pelagibacter phage HTVC008M RepID=M1I7U7_9CAUD
Prohead core scaffold and protease {ECO:0000313|EMBL:AGE60422.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
LSDeep1_scaffold_41_prodigal-single_388
Synechococcus phage S-ShM2, Caudovirales, Viruses

Not on your lists

324950..326020
DNA (1071bp) protein (357aa)
Scaffold prohead core protein n=2 Tax=Synechococcus phage S-ShM2 RepID=E3SK24_9CAUD
Scaffold prohead core protein {ECO:0000313|EMBL:ADO97734.1}; TaxID=445683 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-ShM2.;"
LSDeep1_scaffold_41_prodigal-single_389
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

326034..327359
DNA (1326bp) protein (442aa)
Major capsid n=1 Tax=Pelagibacter phage HTVC008M RepID=M1IP99_9CAUD
Major capsid {ECO:0000313|EMBL:AGE60425.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
LSDeep1_scaffold_41_prodigal-single_390
Aeromonas phage phiAS5, T4likevirus, Caudovirales, Viruses

Not on your lists

327485..327982
DNA (498bp) protein (166aa)
Tail completion and sheath stabilizer protein n=1 Tax=Aeromonas phage phiAS5 RepID=E1A277_9CAUD
Tail completion and sheath stabilizer protein {ECO:0000313|EMBL:ADM80166.1}; TaxID=879630 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Aeromonas phage phiAS5.;"
LSDeep1_scaffold_41_prodigal-single_391
Synechococcus phage S-SSM7, Caudovirales, Viruses

Not on your lists

327991..328437
DNA (447bp) protein (149aa)
UvsY n=2 Tax=Synechococcus phage S-SSM7 RepID=E3SL69_9CAUD
UvsY {ECO:0000313|EMBL:ADO98217.1}; TaxID=445686 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SSM7.;"
LSDeep1_scaffold_41_prodigal-single_392
Cyanophage P-RSM1, Caudovirales, Viruses

Not on your lists

328547..329935
DNA (1389bp) protein (463aa)
UvsW protein n=1 Tax=Cyanophage P-RSM1 RepID=M4QQX2_9CAUD
UvsW protein {ECO:0000313|EMBL:AGH26490.1}; TaxID=536444 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Cyanophage P-RSM1.;"
LSDeep1_scaffold_41_prodigal-single_393
unknown

Not on your lists

329932..330369
DNA (438bp) protein (146aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_394
Synechococcus phage ACG-2014i, T4likevirus, Caudovirales, Viruses

Not on your lists

330495..331079
DNA (585bp) protein (195aa)
Sigma factor for late transcription n=1 Tax=Prochlorococcus phage Syn1 RepID=E3SPL6_9CAUD
Late transcription sigma factor {ECO:0000313|EMBL:AIX26836.1}; TaxID=1493513 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage ACG-2014i.;"
LSDeep1_scaffold_41_prodigal-single_395
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

331089..332150
DNA (1062bp) protein (354aa)
Recombination endonuclease subunit n=1 Tax=Pelagibacter phage HTVC008M RepID=M1IPA8_9CAUD
Recombination endonuclease subunit {ECO:0000313|EMBL:AGE60435.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
hypothetical protein
LSDeep1_scaffold_41_prodigal-single_396
Synechococcus phage S-RSM4, T4likevirus, Caudovirales, Viruses

Not on your lists

332147..333865
DNA (1719bp) protein (573aa)
Recombination endonuclease sunbunit n=1 Tax=Synechococcus phage S-RSM4 RepID=C7BV59_9CAUD
Recombination endonuclease sunbunit {ECO:0000313|EMBL:CAR63288.1}; TaxID=555387 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Synechococcus phage S-RSM4.;"
RecF/RecN/SMC N-terminal domain-containing protein
LSDeep1_scaffold_41_prodigal-single_397
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

333933..334607
DNA (675bp) protein (225aa)
Sliding clamp DNA polymerase accessory protein n=1 Tax=Pelagibacter phage HTVC008M RepID=M1HLW3_9CAUD
Sliding clamp DNA polymerase accessory protein {ECO:0000313|EMBL:AGE60448.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
LSDeep1_scaffold_41_prodigal-single_398
unknown

Not on your lists

334609..334803
DNA (195bp) protein (65aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_399
Pelagibacter phage HTVC008M, Caudovirales, Viruses

Not on your lists

334831..335769
DNA (939bp) protein (313aa)
Sliding clamp loader n=1 Tax=Pelagibacter phage HTVC008M RepID=M1ICV0_9CAUD
Sliding clamp loader {ECO:0000313|EMBL:AGE60449.1}; TaxID=1283076 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Pelagibacter phage HTVC008M.;"
replication factor C
LSDeep1_scaffold_41_prodigal-single_400
unknown

Not on your lists

335867..336496
DNA (630bp) protein (210aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_401
Cyanophage Syn30, Viruses

Not on your lists

336493..336870
DNA (378bp) protein (126aa)
Gp62 clamp loader subunit n=1 Tax=Synechococcus phage S-MbCM6 RepID=H8ZMQ0_9CAUD
Clamp loader subunit {ECO:0000313|EMBL:AGH56232.1}; TaxID=536474 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Cyanophage Syn30.;"
LSDeep1_scaffold_41_prodigal-single_402
Synechococcus phage S-CAM1, Caudovirales, Viruses

Not on your lists

336946..337380
DNA (435bp) protein (145aa)
RegA n=1 Tax=Synechococcus phage S-CAM1 RepID=M4QIW5_9CAUD
RegA {ECO:0000313|EMBL:AGH26897.1}; TaxID=754037 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-CAM1.;"
LSDeep1_scaffold_41_prodigal-single_403
Parvularcula bermudensis, Parvularcula, Parvularculales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

337501..337974
DNA (474bp) protein (158aa)
Molecular chaperone (Small heat shock protein) n=1 Tax=Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC 12087) RepID=E0THT0_PARBH
Molecular chaperone (small heat shock protein)
Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:ADM10223.1}; TaxID=314260 species="Bacteria; Proteobacteria; Alphaproteobacteria; Parvularculales; Parvularculaceae; Parvularcula.;" source="Parvularcula bermudensis (strain ATCC BAA-594 / HTCC2503 / KCTC; 12087).;"
LSDeep1_scaffold_41_prodigal-single_404
unknown

Not on your lists

337922..338152
DNA (231bp) protein (77aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_405
unknown

Not on your lists

338149..338313
DNA (165bp) protein (55aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_406
unknown

Not on your lists

338366..338575
DNA (210bp) protein (70aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_407
unknown

Not on your lists

338572..338793
DNA (222bp) protein (74aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_408
Synechococcus phage S-SM2, Caudovirales, Viruses

Not on your lists

338903..341446
DNA (2544bp) protein (848aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=444860 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Synechococcus phage S-SM2.;"
DNA polymerase n=1 Tax=Synechococcus phage S-SM2 RepID=E3SJ44_9CAUD
LSDeep1_scaffold_41_prodigal-single_409
Rhizobium phage vB_RleM_P10VF, Caudovirales, Viruses

Not on your lists

341501..341959
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:AIK68389.1}; TaxID=1527770 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Rhizobium phage vB_RleM_P10VF.;"
LSDeep1_scaffold_41_prodigal-single_410
unknown

Not on your lists

342012..342563
DNA (552bp) protein (184aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_411

Not on your lists

342856..343794
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Vibrio phage henriette 12B8 RepID=M4MHM2_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGG58204.1}; TaxID=573174 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA phages.;" source="Vibrio phage henriette 12B8.;"
LSDeep1_scaffold_41_prodigal-single_412
unknown

Not on your lists

343794..344246
DNA (453bp) protein (151aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_413
unknown

Not on your lists

344292..344546
DNA (255bp) protein (85aa)

This feature has no annotations

LSDeep1_scaffold_41_prodigal-single_414
Flavobacteria bacterium BAL38, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

344543..344959
DNA (417bp) protein (139aa)
TagD n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J1V2_9FLAO
TagD {ECO:0000313|EMBL:EAZ96280.1}; TaxID=391598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteria bacterium BAL38.;"
cytidyltransferase
LSDeep1_scaffold_41_prodigal-single_415
Mycobacterium phage vB_MapS_FF47, Caudovirales, Viruses

Not on your lists

344946..345686
DNA (741bp) protein (247aa)
Thymidylate synthase n=1 Tax=Mycobacterium phage Muddy RepID=S5XYQ6_9CAUD
Thymidylate synthase {ECO:0000313|EMBL:AGI12314.1}; TaxID=1305710 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Mycobacterium phage vB_MapS_FF47.;"
Displaying items 391-420 of 533 in total

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