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MEL_B2_6_11

Organism: MEL.B2

near complete RP 53 / 55 MC: 14 BSCG 50 / 51 ASCG 0 / 38
Location: 8736..9611

Top 3 Functional Annotations

Value Algorithm Source
whiG; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 262.0
  • Bit_score: 213
  • Evalue 1.00e-52
SIGMA70_2 (db=PatternScan db_id=PS00716 from=248 to=274 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
FliA_WhiG: RNA polymerase sigma factor, F (db=HMMTigr db_id=TIGR02479 from=58 to=279 evalue=2.7e-78 interpro_id=IPR012845 interpro_description=RNA polymerase sigma factor, FliA/WhiG GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.70e-78

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGCATGTATATGACGACTTATTAGGGGAAATCGTTGGATATCTGACAGAGATGAGCGAAGAATTAGAGTACAGTTCTTATAACAAAATTAAAAGGCTTACGGACGAGGAGCTTGAGGCTTTGTGGCATGAATATCTTGCCGATAAGACCCAAAAAGCCCTTAGAGATAAGCTTATTGTTCAATATATTTATCTAACCAGATATGTTATCGGCCGTGTAAAAATGAATCTTCCGCAAACGTTTTCTATAGAAGACATCACAAGTTTTGGCGTGGAAGGACTTATAGATGCAATAGAAAAATATACCCCTGATAAAGGTGCAAGGTTTGAAACTTACGCCCTTATGCGTATTCGCGGTACAATTATTGACAAAATTCGTTCACAGGACTGGGTTCCCCGCTCAACAAGAAAGAAAATCAAAGAAATAAAACTGGTTGCAGAACAGCTAAAACAATCGCTCGGCAGAGCCGCAACAACAACAGAGCTTGCTGCTGCAATGAATATGGAAAAAGAAAAAATAGAGGCACTTCTTGCTGACGAAATGCAGGTTACTTCTATTTATGACAAAAAAGGTACTTCCGAAGAAAGCGTTGAAGTAATTGATACAATTCAGGATGAAAACTCCAAAAACCCTCTTGAGCAGCTTGTTGACAAAGATGTCAAACATGAATTGCAAAATGCACTCAAACGTTTGCCCGAGAGAGAAAGAATGATAATGGTTCTTTACTATCACGAAAACATGACCCTTAAAGAAATCGGTGATACTATAAATGTTTCTGAATCCCGTGTGTGCCAGCTTCATGCACAGGCTATTATGAAACTTAAAAATATTTTAACAACACATCGTTCCGACAGACTCAAACAAAGTATCGTCTAA
PROTEIN sequence
Length: 292
MHVYDDLLGEIVGYLTEMSEELEYSSYNKIKRLTDEELEALWHEYLADKTQKALRDKLIVQYIYLTRYVIGRVKMNLPQTFSIEDITSFGVEGLIDAIEKYTPDKGARFETYALMRIRGTIIDKIRSQDWVPRSTRKKIKEIKLVAEQLKQSLGRAATTTELAAAMNMEKEKIEALLADEMQVTSIYDKKGTSEESVEVIDTIQDENSKNPLEQLVDKDVKHELQNALKRLPERERMIMVLYYHENMTLKEIGDTINVSESRVCQLHAQAIMKLKNILTTHRSDRLKQSIV*