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MEL_B2_8_28

Organism: MEL.B2

near complete RP 53 / 55 MC: 14 BSCG 50 / 51 ASCG 0 / 38
Location: comp(24935..25474)

Top 3 Functional Annotations

Value Algorithm Source
rimM; putative 16S rRNA-processing protein rimM similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 167.0
  • Bit_score: 114
  • Evalue 3.10e-23
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=4 to=168 evalue=2.6e-36 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.60e-36
Translation proteins (db=superfamily db_id=SSF50447 from=3 to=91 evalue=2.1e-17 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.10e-17

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAGTAATTTAGTTTCAATAGGCAAAATATTAAATTTTCATGGCATTAAAGGCGAAGTCAAAATGGGCTTCTCGGCCGGTAAAGAAGATTTAATCAAAAAGCTTAAACAAGTTTATATTTTTCAAAATAATATAAAGCTTACTTATGATGTTTCATCTGTGAGGTTTCATAAAAACTTTGCAATCATCAAATTCAAGCAGATAAACTCGGTAAATGAAGTCATGGAAATAAAAGGACTTCTTGTTCATATTACCGAAGACATGCTCAAATCAAAACTGGAAAAAGATGAATTTTTGATAAAAGACCTTGTTGGTCTTGCGGCTTTTGATACTGATGGCAACAAACTTGGTGTGGTAGCTGATATTGGTGAAAACAAGGCTTCAAACCTTATTGAGATACAAAAAGCTAACGGGTTAAAATTTATGGTTCCGTTCGTAAAAGAATGGGTGCCTGTTGTTGATTTAGATAATCAAAAAATTGTTATCAATATGATTGAGGGAATCGATACAGATTCAACTAAACAGGATATTAAAGAATGA
PROTEIN sequence
Length: 180
MSNLVSIGKILNFHGIKGEVKMGFSAGKEDLIKKLKQVYIFQNNIKLTYDVSSVRFHKNFAIIKFKQINSVNEVMEIKGLLVHITEDMLKSKLEKDEFLIKDLVGLAAFDTDGNKLGVVADIGENKASNLIEIQKANGLKFMVPFVKEWVPVVDLDNQKIVINMIEGIDTDSTKQDIKE*