Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
rimM; putative 16S rRNA-processing protein rimM | similarity |
KEGG
DB: KEGG |
34.7 | 167.0 | 114 | 3.10e-23 | cst:CLOST_1577 |
16S_RimM: 16S rRNA processing protein RimM (db=HMMTigr db_id=TIGR02273 from=4 to=168 evalue=2.6e-36 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.60e-36 | cst:CLOST_1577 |
Translation proteins (db=superfamily db_id=SSF50447 from=3 to=91 evalue=2.1e-17 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel) | iprscan |
interpro
DB: superfamily |
null | null | null | 2.10e-17 | cst:CLOST_1577 |
PRC-barrel domain (db=superfamily db_id=SSF50346 from=98 to=168 evalue=1.8e-15 interpro_id=IPR011033 interpro_description=PRC-barrel-like) | iprscan |
interpro
DB: superfamily |
null | null | null | 1.80e-15 | cst:CLOST_1577 |
(db=HMMPfam db_id=PF01782 from=7 to=87 evalue=1.5e-14 interpro_id=IPR002676 interpro_description=RimM protein GO=Biological Process: rRNA processing (GO:0006364)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.50e-14 | cst:CLOST_1577 |
(db=HMMPfam db_id=PF05239 from=96 to=165 evalue=6.3e-07 interpro_id=IPR007903 interpro_description=PRC-barrel) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 6.30e-07 | cst:CLOST_1577 |
Ribosome_mat_RimM (db=HAMAP db_id=MF_00014 from=4 to=168 evalue=20.832 interpro_id=IPR011961 interpro_description=16S rRNA processing protein RimM GO=Cellular Component: ribosome (GO:0005840), Biological Process: rRNA processing (GO:0006364), Molecular Function: ribosome binding (GO:0043022)) | iprscan |
interpro
DB: HAMAP |
null | null | null | 2.08e+01 | cst:CLOST_1577 |
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; e |
UNIPROT
DB: UniProtKB |
99.4 | 179.0 | 349 | 2.80e-93 | R6QI89_9CLOT | |
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM alias=ACD20_C00090G00010,ACD20_55763.26714.14G0010,ACD20_55763.26714.14_10 id=19849 tax=ACD20 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm | similarity |
UNIREF
DB: UNIREF90 |
46.2 | null | 166 | 5.80e-39 | cst:CLOST_1577 |