Alias: ACD20_26279.54254.14
name | lists | location/seqs | annotations | notes |
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ACD20_48_31
uncultured bacterium, Bacteria
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Not on your lists |
comp(46497..47456)
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ROK family protein
ROK family protein n=5 Tax=Francisella RepID=A0Q5J7_FRATN (db=UNIREF evalue=8.0e-49 bit_score=197.0 identity=39.03 coverage=95.3125)
seg (db=Seg db_id=seg from=261 to=270)
seg (db=Seg db_id=seg from=66 to=75)
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ACD20_48_32
uncultured bacterium, Bacteria
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Not on your lists |
47709..49109
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response regulator receiver modulated diguanylate cyclase
seg (db=Seg db_id=seg from=124 to=140)
seg (db=Seg db_id=seg from=307 to=324)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=152 to=287 evalue=2.9e-15 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
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ACD20_48_33
uncultured bacterium, Bacteria
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Not on your lists |
comp(49202..49930)
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50S ribosomal protein L1
seg (db=Seg db_id=seg from=25 to=40)
seg (db=Seg db_id=seg from=124 to=141)
RIBOSOMAL_L1 (db=PatternScan db_id=PS01199 from=124 to=142 evalue=0.0 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
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ACD20_48_34
uncultured bacterium, Bacteria
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Not on your lists |
comp(50127..50552)
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50S ribosomal protein L11
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=141 evalue=2.9e-88 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=HMMSmart db_id=SM00649 from=9 to=140 evalue=2.8e-78 interpro_id=IPR000911 interpro_description=Ribosomal protein L11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
60S RIBOSOMAL PROTEIN L12 (db=HMMPanther db_id=PTHR11661 from=1 to=139 evalue=1.5e-57 interpro_id=IPR000911 interpro_description=Ribosomal protein L11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD20_48_35
uncultured bacterium, Bacteria
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Not on your lists |
comp(50618..51157)
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NusG antitermination factor
NUSG (db=PatternScan db_id=PS01014 from=162 to=171 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site)
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=10 to=179 evalue=1.1e-71 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=HMMSmart db_id=SM00738 from=7 to=115 evalue=1.0e-41 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
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ACD20_48_36
uncultured bacterium, Bacteria
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Not on your lists |
comp(51202..51465)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
seg (db=Seg db_id=seg from=45 to=57)
SecE (db=HMMPfam db_id=PF00584 from=17 to=67 evalue=6.9e-16 interpro_id=IPR001901 interpro_description=Protein secE/sec61-gamma protein GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
secE_bact: preprotein translocase, SecE sub (db=HMMTigr db_id=TIGR00964 from=17 to=79 evalue=1.4e-12 interpro_id=IPR005807 interpro_description=SecE subunit of protein translocation complex GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
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ACD20_48_37
uncultured bacterium, Bacteria
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Not on your lists |
52171..53490
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3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Petrotoga mobilis SJ95 RepID=AROA_PETMO (db=UNIREF evalue=1.0e-126 bit_score=457.0 identity=54.42 coverage=96.3636363636364)
3-phosphoshikimate 1-carboxyvinyltransferase
3-phosphoshikimate 1-carboxyvinyltransferase
coiled-coil (db=Coil db_id=coil from=275 to=296 evalue=NA)
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ACD20_48_38
uncultured bacterium, Bacteria
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Not on your lists |
53506..54183
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1-acyl-sn-glycerol-3-phosphate acyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Glycerol-3-phosphate (1)-acyltransferase (db=superfamily db_id=SSF69593 from=12 to=209 evalue=3.5e-44)
1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE (db=HMMPanther db_id=PTHR10434 from=8 to=204 evalue=1.4e-30)
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