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ACD20_48_35

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(50618..51157)

Top 3 Functional Annotations

Value Algorithm Source
NusG antitermination factor similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 218
  • Evalue 1.50e-54
NUSG (db=PatternScan db_id=PS01014 from=162 to=171 evalue=0.0 interpro_id=IPR015869 interpro_description=Transcription antitermination protein, NusG, bacteria, conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
nusG: transcription termination/antiterminat (db=HMMTigr db_id=TIGR00922 from=10 to=179 evalue=1.1e-71 interpro_id=IPR001062 interpro_description=Transcription antitermination protein, NusG GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-71

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 540
GTGGAAACTAATCTAAAAGAAAAAAGATGGTATATAGTCCATACTTATTCAGGACACGAAAACAAGGTAAAAGTTAACCTTGAAAAACGTATTGAATTTATGAACATGGGGCATAAGATTTTTAGAATCGAAGTGCCGCATAAAACTGTTACAAAAGTTGCAGGCGGAAAACGACAGGAAAAAGAAGAAAAGATTTTCCCCGGATACGTGTTAGTAGAAATGGTAATGGCTGACGACAGCTGGTATGTTGTTAGGCATACCCCTGGTGTTACAAAATTCGTTGGTGCTGAAAAGAGACCAATTCCTGCACGTGATTCTGAAATAAGAAAAATTATTCAAAGATCACAAACTCAAACTGCAAAAGTTGAGCTTAATGTTAAAGTTGGTGATAAGGTTCGCATTATTAGCGGTCCATTTGCAGATTTCGTCGGTGATATTACAGAAGTATATCCTGATAAGGAAAAATTACGTGCATCAGTATCTATCTTCGGCAGGGACACCCCTGTAGAATTAGAATACAACCAAATTCAAAGAGTCTAA
PROTEIN sequence
Length: 180
VETNLKEKRWYIVHTYSGHENKVKVNLEKRIEFMNMGHKIFRIEVPHKTVTKVAGGKRQEKEEKIFPGYVLVEMVMADDSWYVVRHTPGVTKFVGAEKRPIPARDSEIRKIIQRSQTQTAKVELNVKVGDKVRIISGPFADFVGDITEVYPDKEKLRASVSIFGRDTPVELEYNQIQRV*