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ACD20_48

Alias: ACD20_26279.54254.14

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD20_48_1

Not on your lists

comp(85..978)
DNA (894bp) protein (298aa)
hypothetical protein
Putitive lysogenic conversion protein (Hypothetical protein) n=1 Tax=Enterobacteria phage P2-EC67 RepID=Q858R6_BPP2 (db=UNIREF evalue=4.0e-49 bit_score=198.0 identity=39.53 coverage=95.9731543624161)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=13 to=142 evalue=3.2e-07 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
Uncharacterized protein {ECO:0000313|EMBL:EKE03724.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_48_2

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comp(1655..3097)
DNA (1443bp) protein (481aa)
gcvPB; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
gcvPB; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine dehydrogenase (Decarboxylating), subunit 2 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AET4_CARHZ (db=UNIREF evalue=2.0e-171 bit_score=605.0 identity=61.64 coverage=98.960498960499)
seg (db=Seg db_id=seg from=273 to=287)
ACD20_48_3

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comp(3113..4471)
DNA (1359bp) protein (453aa)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=GCSPA_CARHZ (db=UNIREF evalue=1.0e-116 bit_score=423.0 identity=49.1 coverage=96.6887417218543)
Glycine dehydrogenase (decarboxylating)
Glycine dehydrogenase (decarboxylating)
seg (db=Seg db_id=seg from=138 to=149)
ACD20_48_4

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comp(4471..4866)
DNA (396bp) protein (132aa)
glycine cleavage system H protein
seg (db=Seg db_id=seg from=121 to=131)
LIPOYL (db=PatternScan db_id=PS00189 from=49 to=78 evalue=0.0 interpro_id=IPR003016 interpro_description=2-oxo acid dehydrogenase, lipoyl-binding site)
GLYCINE CLEAVAGE SYSTEM H PROTEIN (db=HMMPanther db_id=PTHR11715 from=1 to=129 evalue=5.1e-48 interpro_id=IPR002930 interpro_description=Glycine cleavage H-protein GO=Cellular Component: mitochondrion (GO:0005739), Cellular Component: glycine cleavage complex (GO:0005960), Biological Process: glycine catabolic process (GO:0006546))
ACD20_48_5

Not on your lists

comp(4869..5999)
DNA (1131bp) protein (377aa)
glycine cleavage system T protein
glycine cleavage system T protein
Aminomethyltransferase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF47_KOSOT (db=UNIREF evalue=1.0e-90 bit_score=337.0 identity=45.62 coverage=96.816976127321)
gcvT: glycine cleavage system T protein (db=HMMTigr db_id=TIGR00528 from=4 to=372 evalue=2.4e-151 interpro_id=IPR006223 interpro_description=Glycine cleavage system T protein GO=Molecular Function: aminomethyltransferase activity (GO:0004047), Biological Process: glycine catabolic process (GO:0006546))
ACD20_48_6

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comp(6112..7275)
DNA (1164bp) protein (388aa)
hypothetical protein
YibE/F family protein n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J818_DESRM (db=UNIREF evalue=3.0e-62 bit_score=242.0 identity=42.11 coverage=81.701030927835)
seg (db=Seg db_id=seg from=6 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=343 to=365)
ACD20_48_7

Not on your lists

comp(7484..8539)
DNA (1056bp) protein (352aa)
Holliday junction ATP-dependent DNA helicase ruvB n=3 Tax=Ruminococcus RepID=C6JAG9_9FIRM (db=UNIREF evalue=1.0e-117 bit_score=426.0 identity=61.04 coverage=92.3295454545455)
Holliday junction DNA helicase subunit RuvB
Holliday junction DNA helicase subunit RuvB
ruvB: Holliday junction DNA helicase RuvB (db=HMMTigr db_id=TIGR00635 from=37 to=341 evalue=1.0e-192 interpro_id=IPR004605 interpro_description=DNA helicase, Holliday junction RuvB type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Molecular Function: four-way junction helicase activity (GO:0009378))
ACD20_48_8

Not on your lists

comp(8749..9717)
DNA (969bp) protein (323aa)
rare lipoprotein A
Putative uncharacterized protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YQB9_9CYAN (db=UNIREF evalue=2.0e-30 bit_score=136.0 identity=42.86 coverage=52.6315789473684)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=23 to=37)
ACD20_48_9

Not on your lists

comp(10018..11286)
DNA (1269bp) protein (423aa)
ARM repeat (db=superfamily db_id=SSF48371 from=15 to=218 evalue=1.4e-11 interpro_id=IPR016024 interpro_description=Armadillo-type fold GO=Molecular Function: binding (GO:0005488))
no description (db=Gene3D db_id=G3DSA:1.25.10.10 from=9 to=212 evalue=1.1e-09 interpro_id=IPR011989 interpro_description=Armadillo-like helical GO=Molecular Function: binding (GO:0005488))
Uncharacterized protein {ECO:0000313|EMBL:EKE03732.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_48_10

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11493..12200
DNA (708bp) protein (236aa)
seg (db=Seg db_id=seg from=71 to=84)
Uncharacterized protein {ECO:0000313|EMBL:EKE03733.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_48_11

Not on your lists

comp(12203..13909)
DNA (1707bp) protein (569aa)
DNA repair protein RecN
DNA repair protein RecN
DNA repair protein RecN n=3 Tax=Clostridium thermocellum RepID=A3DDM0_CLOTH (db=UNIREF evalue=9.0e-105 bit_score=384.0 identity=38.42 coverage=97.8910369068541)
seg (db=Seg db_id=seg from=231 to=243)
ACD20_48_12

Not on your lists

comp(14115..15014)
DNA (900bp) protein (300aa)
NAD(+) kinase (EC:2.7.1.23)
NAD kinase (db=superfamily db_id=SSF111331 from=18 to=294 evalue=1.0e-82 interpro_id=IPR016064 interpro_description=ATP-NAD kinase, PpnK-type GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
POLY(P)/ATP NAD KINASE (db=HMMPanther db_id=PTHR20275 from=62 to=295 evalue=4.1e-67 interpro_id=IPR002504 interpro_description=ATP-NAD/AcoX kinase GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
NAD_kinase (db=HMMPfam db_id=PF01513 from=19 to=274 evalue=3.4e-62 interpro_id=IPR002504 interpro_description=ATP-NAD/AcoX kinase GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
ACD20_48_13

Not on your lists

comp(14980..15834)
DNA (855bp) protein (285aa)
Hemolysin A n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KK38_9FIRM (db=UNIREF evalue=4.0e-74 bit_score=281.0 identity=52.01 coverage=91.9298245614035)
hemolysin A
tly: hemolysin TlyA family protein (db=HMMTigr db_id=TIGR00478 from=9 to=249 evalue=6.4e-99 interpro_id=IPR004538 interpro_description=Haemolysin A GO=Molecular Function: RNA binding (GO:0003723), Biological Process: hemolysis by symbiont of host erythrocytes (GO:0019836))
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=62 to=259 evalue=4.6e-24)
ACD20_48_14

Not on your lists

comp(15861..17279)
DNA (1419bp) protein (473aa)
outer membrane efflux protein
Outer membrane efflux protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRF7_9FIRM (db=UNIREF evalue=1.0e-18 bit_score=98.6 identity=27.45 coverage=83.7209302325581)
seg (db=Seg db_id=seg from=159 to=171)
seg (db=Seg db_id=seg from=212 to=226)
ACD20_48_15

Not on your lists

17807..18061
DNA (255bp) protein (85aa)
seg (db=Seg db_id=seg from=59 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKE03738.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD20_48_16

Not on your lists

18172..20703
DNA (2532bp) protein (844aa)
glycoside hydrolase family 38
glycoside hydrolase family 38
Putative glycoside hydrolase, family 38 n=2 Tax=Vibrio harveyi RepID=A6ALS9_VIBHA (db=UNIREF evalue=9.0e-104 bit_score=382.0 identity=32.93 coverage=94.0758293838863)
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=2 to=271 evalue=5.3e-48 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD20_48_17

Not on your lists

comp(21299..22321)
DNA (1023bp) protein (341aa)
hypothetical protein
seg (db=Seg db_id=seg from=3 to=16)
seg (db=Seg db_id=seg from=211 to=224)
seg (db=Seg db_id=seg from=239 to=258)
ACD20_48_18

Not on your lists

comp(22467..23066)
DNA (600bp) protein (200aa)
exopolyphosphatase
seg (db=Seg db_id=seg from=177 to=190)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=4 to=197 evalue=1.2e-39)
HD (db=HMMPfam db_id=PF01966 from=22 to=140 evalue=3.7e-14 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
ACD20_48_19

Not on your lists

comp(23069..26326)
DNA (3258bp) protein (1086aa)
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase
Chemotaxis protein CheA n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YJV3_9CYAN (db=UNIREF evalue=2.0e-127 bit_score=461.0 identity=39.21 coverage=56.8139963167588)
seg (db=Seg db_id=seg from=339 to=353)
ACD20_48_20

Not on your lists

comp(26330..27421)
DNA (1092bp) protein (364aa)
methyl-accepting chemotaxis sensory transducer
seg (db=Seg db_id=seg from=327 to=338)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
ACD20_48_21

Not on your lists

27891..29369
DNA (1479bp) protein (493aa)
diguanylate cyclase (GGDEF)
Diguanylate cyclase with GAF sensor n=1 Tax=Clostridium thermocellum DSM 2360 RepID=C7HFA9_CLOTM (db=UNIREF evalue=5.0e-44 bit_score=182.0 identity=43.18 coverage=44.0162271805274)
seg (db=Seg db_id=seg from=174 to=189)
seg (db=Seg db_id=seg from=218 to=229)
ACD20_48_22

Not on your lists

29390..30451
DNA (1062bp) protein (354aa)
CheW protein
Chemotaxis protein CheW n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YJU9_9CYAN (db=UNIREF evalue=2.0e-27 bit_score=126.0 identity=28.29 coverage=94.0677966101695)
seg (db=Seg db_id=seg from=271 to=286)
coiled-coil (db=Coil db_id=coil from=180 to=201 evalue=NA)
ACD20_48_23

Not on your lists

30588..32102
DNA (1515bp) protein (505aa)
5'-nucleotidase domain protein
coiled-coil (db=Coil db_id=coil from=178 to=199 evalue=NA)
5-NUCLEOTIDASE-RELATED (db=HMMPanther db_id=PTHR11575:SF7 from=5 to=503 evalue=1.1e-63)
5'-NUCLEOTIDASE-RELATED (db=HMMPanther db_id=PTHR11575 from=5 to=503 evalue=1.1e-63 interpro_id=IPR006179 interpro_description=5'-Nucleotidase/apyrase GO=Biological Process: nucleotide catabolic process (GO:0009166), Molecular Function: hydrolase activity (GO:0016787))
ACD20_48_24

Not on your lists

comp(32150..36019)
DNA (3870bp) protein (1290aa)
DNA-directed RNA polymerase, beta'''' subunit
DNA-directed RNA polymerase, beta'''' subunit
DNA-directed RNA polymerase subunit beta' n=1 Tax=Acaryochloris marina MBIC11017 RepID=RPOC2_ACAM1 (db=UNIREF evalue=0.0 bit_score=1046.0 identity=47.13 coverage=94.7286821705426)
seg (db=Seg db_id=seg from=277 to=290)
ACD20_48_25

Not on your lists

comp(36051..37766)
DNA (1716bp) protein (572aa)
DNA-directed RNA polymerase, gamma subunit n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNB2_9SYNE (db=UNIREF evalue=0.0 bit_score=802.0 identity=65.75 coverage=97.9020979020979)
DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6)
DNA-directed RNA polymerase subunit gamma (EC:2.7.7.6)
seg (db=Seg db_id=seg from=115 to=126)
ACD20_48_26

Not on your lists

comp(37833..41144)
DNA (3312bp) protein (1104aa)
DNA-directed RNA polymerase subunit beta n=1 Tax=Gloeobacter violaceus RepID=RPOB_GLOVI (db=UNIREF evalue=0.0 bit_score=1526.0 identity=69.4 coverage=94.9275362318841)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 (db=HMMPanther db_id=PTHR20856 from=355 to=1076 evalue=0.0 interpro_id=IPR015712 interpro_description=DNA-directed RNA polymerase, subunit 2 GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: ribonucleoside binding (GO:0032549))
ACD20_48_27

Not on your lists


comp(41384..41761)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12
seg (db=Seg db_id=seg from=35 to=61)
seg (db=Seg db_id=seg from=96 to=107)
L12: ribosomal protein L7/L12 (db=HMMTigr db_id=TIGR00855 from=1 to=125 evalue=2.7e-64 interpro_id=IPR000206 interpro_description=Ribosomal protein L7/L12 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD20_48_28

Not on your lists


comp(41791..42324)
DNA (534bp) protein (178aa)
50S ribosomal protein L10
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=3 to=99 evalue=1.7e-26 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Q30KS2_CANFA_Q30KS2; (db=BlastProDom db_id=PD968187 from=23 to=142 evalue=1.0e-05)
Ribosomal_L10 (db=HAMAP db_id=MF_00362 from=2 to=162 evalue=25.701)
ACD20_48_29

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43139..44242
DNA (1104bp) protein (368aa)
glycosyltransferase
glycosyltransferase
Glycosyl transferase, group 1 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2ITG2_NOSP7 (db=UNIREF evalue=4.0e-94 bit_score=348.0 identity=52.75 coverage=92.6630434782609)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF7 from=2 to=346 evalue=6.7e-86)
ACD20_48_30

Not on your lists

44258..46408
DNA (2151bp) protein (717aa)
Amylo-alpha-16-glucosidase n=1 Tax='Nostoc azollae' 0708 RepID=B9YPD1_ANAAZ (db=UNIREF evalue=4.0e-170 bit_score=602.0 identity=44.55 coverage=94.839609483961)
amylo-alpha-16-glucosidase
amylo-alpha-16-glucosidase
seg (db=Seg db_id=seg from=699 to=716)
Displaying items 1-30 of 38 in total

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