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ACD20_10_56

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(61221..61973)

Top 3 Functional Annotations

Value Algorithm Source
NADH ubiquinone oxidoreductase, 20 kDa subunit n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21TB3_RHOFD (db=UNIREF evalue=9.0e-67 bit_score=256.0 identity=49.02 coverage=98.406374501992) similarity UNIREF
DB: UNIREF
  • Identity: 49.02
  • Coverage: 98.41
  • Bit_score: 256
  • Evalue 9.00e-67
NADH ubiquinone oxidoreductase, 20 kDa subunit similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 255.0
  • Bit_score: 255
  • Evalue 1.50e-65
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=39 to=50 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Notes

possible Ni,Fe-hydrogenase III small subunit, hydrogenase-3, six subunit. psort membrane. Has cystein motiff for cordination 4FeS. RnfC? kelly wrighton (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 753
ATGTTTGAGACATTAAAATCAAGGATATATCAGGGTGATCAGGCAATACCCGATATTAAAAAAGCTGTAATAAACAAACAATTTAGGGGCTTACCCTTAATTAATCAGCAGAATTGTACTAATTGCTCACACTGTATATCAATTTGTCCGACAAACGCTATTAGTGAAGACAATTCTATTGATCTTGGAAAATGTATATTCTGCGGAGATTGTGAAAGAGAATGTCTGAATAAGGCAATACAATTCACCAATTTCCATAAAATATCATCAACTTCTCGTGAATATCTAATTGTTGATCCAGAAACAACTCTGAATGACTATGAAGCTAATGCTATTAAATCATCTGAGCAAATCAAGAAACTATTTGGTAAATCCCTGAAACTAAGGCAGGTTTCAGCAGGTGGCTGCAATGGCTGTGAACAGGAATTAAATGCCTGCTCAAATGTAAACTTTGATATGGGAAGGTTTGGGATAGATATTGTTGCTTCTCCCCGGCATGCCGATGGAATCATTATAACCGGCCCTATTACTGAAAATATGAGAAGAGCCCTTGAAGATGCTTATTTATCAACCCCTGATCCTAAAATAATAATTCTTGCCGGTACTTGTGCTATAAGTGGTGGTATTTTCCAGGATTCTGAGGTGCTTAAAAGAGATTTTCTAGAAAAACATAAAATTGATCTATATATTCCCGGCTGCCCAGTTCATCCTTTAACTGTAATTAATGGGATTTTGGGTTTTCTGGAAAATTAG
PROTEIN sequence
Length: 251
MFETLKSRIYQGDQAIPDIKKAVINKQFRGLPLINQQNCTNCSHCISICPTNAISEDNSIDLGKCIFCGDCERECLNKAIQFTNFHKISSTSREYLIVDPETTLNDYEANAIKSSEQIKKLFGKSLKLRQVSAGGCNGCEQELNACSNVNFDMGRFGIDIVASPRHADGIIITGPITENMRRALEDAYLSTPDPKIIILAGTCAISGGIFQDSEVLKRDFLEKHKIDLYIPGCPVHPLTVINGILGFLEN*