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ACD20_30_7

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(8506..9477)

Top 3 Functional Annotations

Value Algorithm Source
pyruvate dehydrogenase rbh KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 313.0
  • Bit_score: 378
  • Evalue 2.00e-102
pyruvate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 313.0
  • Bit_score: 378
  • Evalue 2.00e-102
Dehydrogenase complex, E1 component, alpha subunit n=1 Tax=Geobacter sulfurreducens RepID=Q74AD3_GEOSL (db=UNIREF evalue=1.0e-94 bit_score=350.0 identity=60.58 coverage=95.9876543209877) similarity UNIREF
DB: UNIREF
  • Identity: 60.58
  • Coverage: 95.99
  • Bit_score: 350
  • Evalue 1.00e-94

Lists

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Notes

second most common annotation is transketolase. not sure if this is full pdc. E1 complex should have ~24 subunits kelly wrighton (11/15/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 972
ATGATAGAAAAATTTGAAAAGCACGAATTAAAAAATTTTTATAAGCAGATGGTGTTGCTTAGAGAATTTGAGCAAACAGCTGCTGAAATGTATCTTAGAGGTAAAATATCAGGATTTACTCACTTATATATAGGCCAGGAAGCAATAGGCGTAGGTACTATTTCTGCCTTATTTGATAAAGATTATATTGTAAGCGCATATCGCGAACACGGGCATGCCATAGCAAAAGGAATCTCACCAAGATCGGTTATGGCGGAATTGTTTGGCAAAGAAACGGGTTGCTGCCATGGACTTGGGGGTTCTATGCATCTTTTTGATCTAGAAAAAAGATTTATGGGCGGCTATGCCATAGTTGGCGGCGGAATTCCTATTGCAGTCGGGCTTGGTTTAGCAATAAATTACAAAAAAGAAAATGCAATTTGCGTATGTTTCTTTGGAGATGGCGCGGTTAATCAAGGAGCATTTCATGAAAGCTTAAACCTTGCTAAATTATGGAATTTGCCTGTCTTATTTATTTGCGAAAATAACCTTTATGCTATGGGAACAGAAGTCATGAGAGCATCCTCCGTTGTACAGATAGCTAAAAGAGCACAAACTTATGATATACCTAGTGAATGCGTTAACGGCATGGATGTATTAAAAGTTCATGAAGCTGTTGAAAATGCAGCTAAATGGGTTAGAAGCGGAGCAGGACCTTATTTTATAGAAGCAAAAACTTATAGGTACAGAGCTCATTCTATGGCTGATCCCGGAAGATACAGAACTTTATTAGAAGAAGAAGTATGGAAAGAAAGAGATCCTATAGATAATTTTGCAAAACGACTTGTCGATACAGGATTATTTGATTCTGATGAATTAAAGGAAATCAAAGAAGATTCAATAAACGAGGTAAATGATTCAGTAAAATTTGCTGATGAAAGCCCTGATCCAAAACCTGAAATGCTGTGTAAATACATATATGCAGAAAAATAG
PROTEIN sequence
Length: 324
MIEKFEKHELKNFYKQMVLLREFEQTAAEMYLRGKISGFTHLYIGQEAIGVGTISALFDKDYIVSAYREHGHAIAKGISPRSVMAELFGKETGCCHGLGGSMHLFDLEKRFMGGYAIVGGGIPIAVGLGLAINYKKENAICVCFFGDGAVNQGAFHESLNLAKLWNLPVLFICENNLYAMGTEVMRASSVVQIAKRAQTYDIPSECVNGMDVLKVHEAVENAAKWVRSGAGPYFIEAKTYRYRAHSMADPGRYRTLLEEEVWKERDPIDNFAKRLVDTGLFDSDELKEIKEDSINEVNDSVKFADESPDPKPEMLCKYIYAEK*