ggKbase home page

ACD20_99_14

Organism: ACD20

near complete RP 51 / 55 MC: 13 BSCG 50 / 51 MC: 4 ASCG 0 / 38
Location: comp(12367..12987)

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 208.0
  • Bit_score: 259
  • Evalue 1.20e-66
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=206 evalue=9.1e-89 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.10e-89
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=206 evalue=5.9e-67) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.90e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 621
TTGGCTAGGTATACAGGACCAGTATGTAAAAAATGTAGAGCGGAAGGACAAAAGCTTTTCTTAAAAGGCGAACGCTGCTATACAAATAAATGTTCAGTTGGCAAGCGTGCATATCCACCTGGGCAGCATGGACAAGCAAGAAAAAAATTATCTGAATATGCTATACATTTAAGAGAGAAACAAAAAGTTCGTACTACATATTTAGTGCTTGAAAAACAATTTGCCAGATATTTTGAGCAAGCTGAACGCAAAAAAGGTGTTACAGGCACTATACTATTACAAATTCTTGAATCAAGATTTGATAATGTAATGTATCAATCAGGTTTGGTTTCAAGTCGTAAGCAGGCAAGACAATTAATAAGACATGGACACTTCTTAATCAAAGGAAGAAAAGTTAATGTTCCTTCTTACAGATTAAAACCAGGTGATGAAATAACAGTTAAACAAAAAAGCCAGAAGTTAGTAAAAGAAGTAATTGAAACACAAACAGTTACTCCACAACCAAGATGGCTCAGTGTGGACAAAGAAGCTTTAAAAGTAAGAGTTGAGTCCTTACCAGAGAGAGAAGATCTGAGTCCAGATATCAAAGAACACTTAATTATCGAACACTATTCCAAATAG
PROTEIN sequence
Length: 207
LARYTGPVCKKCRAEGQKLFLKGERCYTNKCSVGKRAYPPGQHGQARKKLSEYAIHLREKQKVRTTYLVLEKQFARYFEQAERKKGVTGTILLQILESRFDNVMYQSGLVSSRKQARQLIRHGHFLIKGRKVNVPSYRLKPGDEITVKQKSQKLVKEVIETQTVTPQPRWLSVDKEALKVRVESLPEREDLSPDIKEHLIIEHYSK*