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13_1_40cm_4_scaffold_3443

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_3443_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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3..761
DNA (759bp) protein (253aa)
Histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
GAF sensor hybrid histidine kinase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AYB8_HERA2
GAF sensor hybrid histidine kinase
13_1_40cm_4_scaffold_3443_2
unknown

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1021..1998
DNA (978bp) protein (326aa)

This feature has no annotations

13_1_40cm_4_scaffold_3443_3
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

2293..3828
DNA (1536bp) protein (512aa)
hypothetical protein Tax=RBG_16_Zixibacteria_43_9_curated
id=14631018 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
BNR/Asp-box repeat-containing protein
13_1_40cm_4_scaffold_3443_4
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4069..5016)
DNA (948bp) protein (316aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CY24_PSEUX
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain A
13_1_40cm_4_scaffold_3443_5
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(5381..5821)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037BF18B
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_40cm_4_scaffold_3443_6
unknown

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comp(6125..6655)
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_40cm_4_scaffold_3443_7
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6621..7298)
DNA (678bp) protein (226aa)
transcriptional regulator n=1 Tax=Streptomyces sulphureus RepID=UPI00030C745A
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD54514.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
13_1_40cm_4_scaffold_3443_8
unknown

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7399..8037
DNA (639bp) protein (213aa)

This feature has no annotations

13_1_40cm_4_scaffold_3443_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(8046..8738)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Actinomadura flavalba RepID=UPI000368C0B9
histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
putative sensor kinase
13_1_40cm_4_scaffold_3443_10
unknown

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comp(8735..9034)
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_4_scaffold_3443_11
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9043..11529)
DNA (2487bp) protein (829aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfoto
DNA gyrase subunit A n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIH8_DESK7
13_1_40cm_4_scaffold_3443_12
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(11531..12781)
DNA (1251bp) protein (417aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RBG_13_Chloroflexi_52_14_curated
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PLG0_9FIRM
13_1_40cm_4_scaffold_3443_13
RBG_13_Chloroflexi_54_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(12778..13752)
DNA (975bp) protein (325aa)
fatty acid/phospholipid synthesis protein PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RBG_13_Chloroflexi_54_9_curated
Phosphate acyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDG9_THET1
fatty acid/phospholipid synthesis protein PlsX
13_1_40cm_4_scaffold_3443_14
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(13765..15585)
DNA (1821bp) protein (607aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=309801 species="Bacteria; Ch
DNA gyrase subunit B n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZB8_THERP
13_1_40cm_4_scaffold_3443_15
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15704..16414)
DNA (711bp) protein (237aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HA
glycine dehydrogenase subunit beta (EC:1.4.4.2)
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYJ5_9FIRM
Displaying 15 items

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