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13_1_40cm_4_scaffold_2193

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_4_scaffold_2193_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..328)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF4159
13_1_40cm_4_scaffold_2193_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(325..1158)
DNA (834bp) protein (278aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6H8_MYXXD
tetrapyrrole methylase
13_1_40cm_4_scaffold_2193_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1160..2182)
DNA (1023bp) protein (341aa)
alias=gwe2_scaffold_8_567 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
alias=gwe2_scaffold_8_567 id=7202228 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
13_1_40cm_4_scaffold_2193_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2201..2533)
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T2_GEMAT
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_4_scaffold_2193_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2574..2975
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7T1_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
methylmalonyl-CoA epimerase
13_1_40cm_4_scaffold_2193_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3501..4226
DNA (726bp) protein (242aa)
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2); K03474 pyridoxine 5-phosphate synthase [EC:2.6.99.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pdxJ; pyridoxine 5'-phosphate synthase (EC:2.6.99.2)
Pyridoxine 5'-phosphate synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S9_GEMAT
13_1_40cm_4_scaffold_2193_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4239..5903
DNA (1665bp) protein (555aa)
Hpt domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_4_scaffold_2193_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

5986..6939
DNA (954bp) protein (318aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7S7_GEMAT
hypothetical membrane protein; K07027 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_4_scaffold_2193_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6936..7829
DNA (894bp) protein (298aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ISPE_SOLUE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
13_1_40cm_4_scaffold_2193_10
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

comp(7867..8880)
DNA (1014bp) protein (338aa)
Ig domain protein group 2 domain protein n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PM33_MEIRD
Ig domain-containing protein
Tax=CG_Bacteroid_01
13_1_40cm_4_scaffold_2193_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8932..10047)
DNA (1116bp) protein (372aa)
OmpA family protein n=1 Tax=Leptospira santarosai str. CBC523 RepID=M6RXA4_9LEPT
peptidoglycan-associated lipoprotein Tax=RBG_16_RIF_CHLX_70_13_curated
OmpA/MotB domain-containing protein
13_1_40cm_4_scaffold_2193_12
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10107..11105)
DNA (999bp) protein (333aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_40cm_4_scaffold_2193_13
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11105..12547)
DNA (1443bp) protein (481aa)
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
periplasmic component of the Tol biopolymer transport system
13_1_40cm_4_scaffold_2193_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12595..14316)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000363D56C
secreted protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
conserved protein of unknown function
13_1_40cm_4_scaffold_2193_15
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(14313..15005)
DNA (693bp) protein (231aa)
3-oxoacid CoA-transferase Tax=CG_Elusi_04
Subunit A 3-oxoadipate CoA-transferase id=4917921 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate CoA-transferase
13_1_40cm_4_scaffold_2193_16
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15028..15912)
DNA (885bp) protein (295aa)
3-oxoadipate:succinyl-CoA transferase subunit A; K01039 glutaconate CoA-transferase, subunit A [EC:2.8.3.12] Tax=GWC2_Elusimicrobia_65_9_curated
Subunit A 3-oxoadipate CoA-transferase id=4917917 bin=GWA2_Elusimicrobia_66_18 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
3-oxoadipate:succinyl-CoA transferase subunit A
13_1_40cm_4_scaffold_2193_17
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15924..16139)
DNA (216bp) protein (72aa)
4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=GWA2_Elusimicrobia_69_24_curated
Acetylornithine aminotransferase id=4970915 bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
4-aminobutyrate aminotransferase
13_1_40cm_4_scaffold_2193_18
unknown

Not on your lists

16682..17269
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_40cm_4_scaffold_2193_19
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

comp(17218..18846)
DNA (1629bp) protein (543aa)
aldH; aldehyde dehydrogenase (EC:1.2.1.-); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
aldH; aldehyde dehydrogenase (EC:1.2.1.-)
1-pyrroline-5-carboxylate dehydrogenase 1 id=4917885 bin=GWA2_Elusimicrobia_66_18 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
13_1_40cm_4_scaffold_2193_20
GWC2_Elusimicrobia_65_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(18843..20198)
DNA (1356bp) protein (452aa)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase id=4917884 bin=GWA2_Elusimicrobia_66_18 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
class III aminotransferase Tax=GWC2_Elusimicrobia_65_9_curated
class III aminotransferase
13_1_40cm_4_scaffold_2193_trna_1
unknown

Not on your lists

20278..20348
DNA (71bp)
transferRNA
13_1_40cm_4_scaffold_2193_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20372..20971)
DNA (600bp) protein (200aa)
Phosphoesterase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IR81_KORVE
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:ABF40619.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versat
Displaying 22 items

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