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13_1_20cm_3_scaffold_98_22

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(24564..26288)

Top 3 Functional Annotations

Value Algorithm Source
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=GWC2_RIF_CHLX_73_18_curated UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 583.0
  • Bit_score: 529
  • Evalue 6.30e-147
General secretory pathway protein E id=4832831 bin=GWC2_Chloroflexi_73_18 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 583.0
  • Bit_score: 529
  • Evalue 4.50e-147
type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 573.0
  • Bit_score: 513
  • Evalue 9.50e-143

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Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1725
ATGGCCTCCGAGCTTGCGTTGGCTGTGCTGCCCGCACCCGACCGCGCGCCCCGCTTTGGGGAGCGCCTGGTTGCATCGCGGCTGATCAGCGAGGGTCAGCTGCGTCGTGCCCTTGACCAGCAGGCCCAGAGCCCCCGGTTTCTGGGCGCGGTCCTACTCGAGCTCGGCCTCATCGACGAGGACAGGCTTGCCGCCAAGCTGGGTGAGCATCTGCAGGTCCCGTTCGCCGACCTCCGGCGCGAAGCGATTGATCCAGCTGCGGCCCAGTTGATCCCCGCGGAGTTCGCACGAAAGAACGTCGTGCTCCCGATACGGGAGCATGACGGCGCGCTACTTGTCGCGATGGAGGATCCCGGCAACCTGCACCTTGTCAATGACCTGCGGTTGATCACAGGCCTGCAGATCGTCCCGCACATAGCGGGGCGCTCGGACATCCTGGCCAACTTGAGCCGGGTCCACAGCATGCAACCGAGGATCCACGAGGCAGCACGCTCGCTGGAGGAGAGCCGGCCGCAGCTGACCGGGGGAAGATCGATGGTGTTCGAGCTCTCGAGCATCACTGCAACCTCCCCAGCCGTCGACATCGTCAACATGCTCATCACTCAGGGACTCCGAGACCGCGCGTCCGACATCCACGTCGAGCCGCAGAAGGACTTCCTGCGCATCCGGTTCCGGATTGACGGCGTCTTGCAGGACGTGGCGCACCTGCCCACGGCGACCGGGGCGGCTGTTGCTTCCCGAATCAAGATCATGGCCGCGATGAACATCGTGGAGCGGCGGCGCGCCCAGGACGGACAGATCAGCCTGACCGTCGACGGCCGCGATCTCGATGTGCGAGTGGCGACCATCGAAACGATCTGGGGCGAGAAGCTGGTGCTGCGGCTGCTGGACAGGCGTCGCTCACTGATCGCCCTGCGCCAGCTGGGGTTCTCGAGCGAGGCATACGAGCGATTCCACGCGATGCTTCATTCGCCGTACGGGATGATCATCGTCTCCGGTCCGACCGGCAGCGGAAAGACGACGACCCTGTACGCGGCGATCCACGAGCTCGACCAGCAGGTCCGCAACATCATGACCATCGAAGACCCGGTCGAGTACACGTTCGACAACATCAACCAGAGCCAGATCAACAAGCTGGCTGACATCAGCTTCGCGAACGGGCTGCGGGCGATCCTGCGACAGGACCCGGACATCATCCTGGTGGGGGAGATTCGTGACCGGGAGACAGCCGAGATCGCGGTGCAGTCGGCCCTCACCGGGCACATGGTCCTGTCCTCGCTTCACGCGACGGATGGCCCAGGCGCGCTGCTGCGATTCATCGATATGGGGATTGAAGGCTTCCTGATCGCATCGTCGGTGATCGCCATCGTCGCCCAGCGTCTCGTACGAAAGGTGTGCGACGGCTGCAAGACGTCTCACGCGCCGACGGCCGAGGAGATGGAGTTTGCCGCTTCGGTGGGCGCGGAACCGCCGAGGCGTCTTTATCACGGGGTCGGATGCGCAAGGTGCAACCACACCGGCTACTACGACCGGGTCGGGGTGTTCGAAGTGCTCACGATGACAGACGAGCTCCGGCGGGCGGTGACCGGCCGCGCGGGACATCGGGAGATCATGGACGCCGCCGTCAAAGGCGGGGCGGTGCCGTTGCGCCGGGACGCGTGGGACAAGGCGTCGGCGGGCGTGACCACCGTGTCCGAAATCCTGCGCAGCGTTTACATCCTGTAA
PROTEIN sequence
Length: 575
MASELALAVLPAPDRAPRFGERLVASRLISEGQLRRALDQQAQSPRFLGAVLLELGLIDEDRLAAKLGEHLQVPFADLRREAIDPAAAQLIPAEFARKNVVLPIREHDGALLVAMEDPGNLHLVNDLRLITGLQIVPHIAGRSDILANLSRVHSMQPRIHEAARSLEESRPQLTGGRSMVFELSSITATSPAVDIVNMLITQGLRDRASDIHVEPQKDFLRIRFRIDGVLQDVAHLPTATGAAVASRIKIMAAMNIVERRRAQDGQISLTVDGRDLDVRVATIETIWGEKLVLRLLDRRRSLIALRQLGFSSEAYERFHAMLHSPYGMIIVSGPTGSGKTTTLYAAIHELDQQVRNIMTIEDPVEYTFDNINQSQINKLADISFANGLRAILRQDPDIILVGEIRDRETAEIAVQSALTGHMVLSSLHATDGPGALLRFIDMGIEGFLIASSVIAIVAQRLVRKVCDGCKTSHAPTAEEMEFAASVGAEPPRRLYHGVGCARCNHTGYYDRVGVFEVLTMTDELRRAVTGRAGHREIMDAAVKGGAVPLRRDAWDKASAGVTTVSEILRSVYIL*