ggKbase home page

13_1_20cm_3_scaffold_98

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_98_1
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

2..2092
DNA (2091bp) protein (697aa)
Fibronectin type III domain protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6X452_CELAD
fibronectin type iii domain protein Tax=GWA1_Bdellovibrionales_52_35_curated
fibronectin type iii domain protein
13_1_20cm_3_scaffold_98_2
Toxoplasma gondii, Toxoplasma, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

2166..3341
DNA (1176bp) protein (392aa)
Chloride transporter, chloride channel (ClC) family protein n=1 Tax=Toxoplasma gondii ME49 RepID=S8F2G9_TOXGO
Chloride channel protein {ECO:0000256|RuleBase:RU361221}; TaxID=508771 species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Sarcocystidae; Toxoplasma.;" sour
voltage gated chloride channel domain-containing protein
13_1_20cm_3_scaffold_98_3
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3313..6819)
DNA (3507bp) protein (1169aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003821CA5
Uncharacterized protein {ECO:0000313|EMBL:EWT01753.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
glycosyl transferase possibly involved in lipopolysaccharide synthesis
13_1_20cm_3_scaffold_98_4
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6792..8096)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036DD92E
Uncharacterized protein {ECO:0000313|EMBL:EWT01754.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
13_1_20cm_3_scaffold_98_5
unknown

Not on your lists

comp(8140..8373)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_6
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8396..9940)
DNA (1545bp) protein (515aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangi
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003749F84
hypothetical protein
13_1_20cm_3_scaffold_98_7
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9937..10914)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000373CBBD
Uncharacterized protein {ECO:0000313|EMBL:EWT01757.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
13_1_20cm_3_scaffold_98_8
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10911..12095)
DNA (1185bp) protein (395aa)
second mannosyl transferase (EC:2.-.-.-)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI000372D839
Mannosyl transferase {ECO:0000313|EMBL:KJK10516.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
13_1_20cm_3_scaffold_98_9
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12098..13630)
DNA (1533bp) protein (511aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI0003689944 rbh
Putative polysaccharide biosynthesis protein {ECO:0000313|EMBL:BAJ30415.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora
putative polysaccharide biosynthesis protein
13_1_20cm_3_scaffold_98_10
Streptomyces olindensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13627..14838)
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI00035C68C4
Uncharacterized protein {ECO:0000313|EMBL:KDN72549.1}; TaxID=358823 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces olindensis.;"
hypothetical protein
13_1_20cm_3_scaffold_98_11
unknown

Not on your lists

comp(14835..16202)
DNA (1368bp) protein (456aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_12
unknown

Not on your lists

comp(16367..17443)
DNA (1077bp) protein (359aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_13
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17645..18700
DNA (1056bp) protein (352aa)
twitching motility protein PilT n=1 Tax=Kribbella catacumbae RepID=UPI000376ACA8
Type IV pilus assembly protein PilT {ECO:0000313|EMBL:AEK43014.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediter
pilT; type IV pilus assembly protein PilT
13_1_20cm_3_scaffold_98_14
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18675..19073)
DNA (399bp) protein (133aa)
Peptidase a24a, prepilin type iv peptidase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TEF3_HELMI
Peptidase a24a, prepilin type iv peptidase {ECO:0000313|EMBL:ABZ82872.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacte
peptidase a24a, prepilin type iv peptidase
13_1_20cm_3_scaffold_98_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(19166..19531)
DNA (366bp) protein (122aa)
general secretion protein Tax=GWC2_RIF_CHLX_73_18_curated
General secretion family protein id=4832863 bin=GWC2_Chloroflexi_73_18 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_20cm_3_scaffold_98_16
unknown

Not on your lists

comp(19678..19860)
DNA (183bp) protein (61aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_17
unknown

Not on your lists

comp(19857..20174)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_18
unknown

Not on your lists

comp(20620..22350)
DNA (1731bp) protein (577aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_19
unknown

Not on your lists

comp(22347..22904)
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_20
unknown

Not on your lists

comp(22901..23338)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_21
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(23338..24513)
DNA (1176bp) protein (392aa)
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWC2_RIF_CHLX_73_18_curated
Type IV pilus assembly protein PilC id=4832832 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type IV pilus assembly protein PilC
13_1_20cm_3_scaffold_98_22
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(24564..26288)
DNA (1725bp) protein (575aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=GWC2_RIF_CHLX_73_18_curated
General secretory pathway protein E id=4832831 bin=GWC2_Chloroflexi_73_18 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type IV pilus assembly protein PilB
13_1_20cm_3_scaffold_98_23
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26386..26937)
DNA (552bp) protein (184aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EJN08566.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteoba
LuxR family two component transcriptional regulator id=1246929 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_98_24
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(27096..27785)
DNA (690bp) protein (230aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM75_9CHLR
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFH86875.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;
LuxR family transcriptional regulator
13_1_20cm_3_scaffold_98_25
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27782..28456)
DNA (675bp) protein (225aa)
signal transduction histidine kinase with CheB and CheR activity n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C5705
Uncharacterized protein {ECO:0000313|EMBL:KJK33209.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noc
DegS sensor signal transduction histidine kinase
13_1_20cm_3_scaffold_98_26
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28662..29294)
DNA (633bp) protein (211aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQP6_9BACL
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EED07557.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Al
two component LuxR family transcriptional regulator
13_1_20cm_3_scaffold_98_27
unknown

Not on your lists

29512..29865
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_28
unknown

Not on your lists

comp(29862..30212)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_20cm_3_scaffold_98_29

Not on your lists

comp(30338..31276)
DNA (939bp) protein (313aa)
Lipase/esterase {ECO:0000313|EMBL:ACF04196.1}; EC=3.1.1.- {ECO:0000313|EMBL:ACF04196.1};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Lipase/esterase n=1 Tax=uncultured bacterium RepID=B3VP83_9BACT
lipase/esterase
Displaying 29 items

View Taxonomy