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13_1_20cm_3_scaffold_11226

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_11226_1
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..1419)
DNA (1419bp) protein (473aa)
RHS repeat-associated core domain protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X1X0_9PSEU
RHS repeat-associated core domain protein {ECO:0000313|EMBL:EHR52039.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;"
YD repeat-containing protein
13_1_20cm_3_scaffold_11226_2
unknown

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1450..1770
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_20cm_3_scaffold_11226_3
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2043..2621
DNA (579bp) protein (193aa)
ECF sigma factor n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=E2Q3D3_STRC2
ECF sigma factor {ECO:0000313|EMBL:EFL00207.1}; Flags: Fragment;; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain
RNA polymerase, sigma-24 subunit, ECF subfamily
13_1_20cm_3_scaffold_11226_4
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2771..3748)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI000368FA9F
Uncharacterized protein {ECO:0000313|EMBL:KII00075.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
hypothetical protein
13_1_20cm_3_scaffold_11226_5
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3754..5685)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PIH9_9ACTO
Transcriptional regulator, SARP family {ECO:0000313|EMBL:ACZ85408.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptospo
SARP family transcriptional regulator rbh
13_1_20cm_3_scaffold_11226_6
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5942..6730
DNA (789bp) protein (263aa)
ABC transporter n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI000360ADB9 rbh
Glutamate uptake system ATP-binding protein {ECO:0000313|EMBL:EMF30737.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ga
ABC transporter rbh
13_1_20cm_3_scaffold_11226_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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6757..7662
DNA (906bp) protein (302aa)
Extracellular amino acid ABC transporter substrate-binding protein, PAAT family n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F232_MODMB
Extracellular amino acid ABC transporter substrate-binding protein, PAAT family {ECO:0000313|EMBL:CCH89695.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae;
extracellular amino acid ABC transporter substrate-binding protein, PAAT family
13_1_20cm_3_scaffold_11226_8
Streptomyces rubellomurinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7827..8282
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Streptomyces vitaminophilus RepID=UPI00035CDAE8
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJS57610.1}; TaxID=1615590 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rubellomur
gluC2; putative glutamate ABC transporter permease
13_1_20cm_3_scaffold_11226_9
unknown

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8228..8401
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_3_scaffold_11226_10
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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8398..9237
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036DC54F
Putative glutamate ABC transporter permease protein {ECO:0000313|EMBL:AEW96910.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Strepto
glutamate ABC transporter permease
13_1_20cm_3_scaffold_11226_11
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9300..9998
DNA (699bp) protein (233aa)
transcriptional regulator n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00036A79D7
Transcriptional regulator {ECO:0000313|EMBL:KJY31232.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
two-component system regulator
13_1_20cm_3_scaffold_11226_12
Streptomyces albulus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10009..11448
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1395572 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" so
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Frankia sp. CN3 RepID=G6HJY5_9ACTO rbh
two-component system sensor kinase
13_1_20cm_3_scaffold_11226_13
Pseudonocardia sp. P1, Pseudonocardia, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11445..11939
DNA (495bp) protein (165aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE85D
13_1_20cm_3_scaffold_11226_14
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12104..12334
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KJQ55974.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
13_1_20cm_3_scaffold_11226_15
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12352..13965)
DNA (1614bp) protein (538aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI000382CB64 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEY91096.1}; TaxID=1133850 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. j
hypothetical protein
13_1_20cm_3_scaffold_11226_16
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13962..15506)
DNA (1545bp) protein (515aa)
glycosyltransferase n=1 Tax=Streptomyces acidiscabies RepID=UPI000288E66F rbh
Glycosyltransferase {ECO:0000313|EMBL:KJY22593.1}; TaxID=1609135 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
hypothetical protein
13_1_20cm_3_scaffold_11226_17
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15503..15760)
DNA (258bp) protein (86aa)
Glycosyl transferase n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6K9M6_STRNV
Glycosyl transferase {ECO:0000313|EMBL:KFF99737.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
glycosyltransferase
Displaying 17 items

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